Alteromonas pelagimontana: CA267_009465
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Entry
CA267_009465 CDS
T06582
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apel
Alteromonas pelagimontana
Pathway
apel03030
DNA replication
apel03410
Base excision repair
apel03420
Nucleotide excision repair
apel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA267_009465 (polA)
03410 Base excision repair
CA267_009465 (polA)
03420 Nucleotide excision repair
CA267_009465 (polA)
03440 Homologous recombination
CA267_009465 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apel03032
]
CA267_009465 (polA)
03400 DNA repair and recombination proteins [BR:
apel03400
]
CA267_009465 (polA)
Enzymes [BR:
apel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA267_009465 (polA)
DNA replication proteins [BR:
apel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CA267_009465 (polA)
DNA repair and recombination proteins [BR:
apel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CA267_009465 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CA267_009465 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
LeuA_dimer
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QJR80991
UniProt:
A0A6M4MCU1
LinkDB
All DBs
Position
complement(2114681..2117449)
Genome browser
AA seq
922 aa
AA seq
DB search
MSNNQNPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVINMLRSLIKQYHPSHIAV
VFDAKGKTFRDEIYKEYKANRPQMPDELRSQIEPLHNIIRAMGLPIIIEDGVEADDVIGT
LAHAATAKGIDTLISTGDKDMAQLVNKHVMLINTMTNQLLDVEGVKEKFGIPPELVVDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGIDAIYKNLDKIADLGFRGSKTLAVKMQEYE
EQARISYTLATISLDVKLEYTPETLTPTQPDNDALKHLFAEYEFKRWHSEIASEVAADAS
AKESSGAVAPDTAPVSDISADNYETIFSEADFDRWLEKLKAAPLIAFDTETTSLDYMEAQ
LVGVSFCTAPGEAAYVPVAHDYPDAPEQLNRDWVLAKLKPLLEDENIKKVGQHIKYDKNV
LANYDITLRGIAFDTMLESYVLNSTATRHDMDSLALAYLSHKTIHFEEIAGKGAKQLTFN
QIALEEAAPYAAEDADITFRLHQILWEKLRKEEKLKTILVDIEVPLSSVLSRMEQSGVLI
DSQQLKQQSQTLAKRIIELEKAVHEQAGETFNLGSTKQLQQILFEKLAIPVLKKTPKGAP
STSEEVLQELALEYPIPKMIMDYRGMTKLKSTYTDKLPKMINHRTGRVHTSYHQAVTATG
RLSSTDPNLQNIPIRTEEGRRVRQAFVPREGYKIVAADYSQIELRIMAHLSQDKGLLSAF
SEGKDIHKATAAEVFGVALEDVTSDQRRSAKAINFGLIYGMSAFGLSRQLAIPRHDAQLY
MNLYFERYPGVLQYMDETRQHAKEKGYVETVLGRRLYLPDIKASNGARRKGAERAAINAP
MQGTAADIIKMAMLKVDEWITQHAKQDVHMMMQVHDELVFEIKEHLVEEYKEKIVSLMQQ
AANLSVPLVVEAGVGENWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataaccaaaatcctccgttcatcctggtggatggatcgtcttaccttttccgt
gcatttcatgggctccctccccttaccaattcgaaagggcaagatacgggtgcgatctat
ggtgtgatcaacatgctacgtagcttaatcaagcaatatcatccttcgcatattgcagtt
gtgtttgatgccaaaggtaaaacctttcgtgacgaaatatataaagagtataaagctaac
cgccctcagatgcccgacgagctcagaagccagatagaaccgcttcataacattattcga
gcgatgggtttacctattatcattgaagatggggttgaggctgatgatgtcattggcaca
ctggctcacgccgccacagcaaagggaattgatacgttaatcagcaccggcgacaaagat
atggcgcagctggtaaataagcacgtcatgctgattaatacaatgaccaatcagttgttg
gatgttgaaggcgtaaaagagaaatttggtattccgccggaactggtggtggatttcctt
gcgctaaaaggagacaaagtagacaacattcccggcgtaccgggagtgggcgataaaagc
gcgcaggctcttttaaatggtatcggcggaattgatgccatttacaaaaatctggataaa
attgccgatctgggattccgtggcagtaagactttagcagtaaaaatgcaggagtacgaa
gaacaagcgcggatctcatacacgttggcaactatcagtctggatgtaaaactggaatat
acgccagagacccttacgcccacacaacctgataacgacgccctcaaacacctctttgct
gaatatgaattcaaacgctggcatagcgaaatagcttcagaagtggcagctgatgcttct
gcaaaagaaagttctggtgctgtagcgccagacaccgcgcctgtatcagatattagcgct
gacaattacgaaacaattttttccgaggcagattttgatcggtggctggaaaagctgaaa
gctgcaccactgatagcctttgatacggaaaccaccagtctggattatatggaagctcaa
ctggtaggcgtatctttttgtaccgcacctggtgaagcagcctatgttccggttgctcat
gattaccctgacgcgccagaacaactcaatagagactgggtactcgctaagctcaagcct
ttacttgaagatgaaaatatcaaaaaggttggacagcatatcaagtacgataagaacgtg
ttggctaactacgatatcactttgcgcggcattgcctttgataccatgctggagtcttac
gtgctgaacagcacagccacacgccacgatatggattcgctggcgttagcttaccttagt
cacaaaactattcattttgaagaaattgctggcaaaggcgcaaagcagcttacgtttaat
caaattgcgcttgaagaagccgctccctatgccgcagaagatgctgatattacatttcgg
ctacaccagattttgtgggaaaaacttcgcaaagaagaaaagcttaaaaccatactggtc
gatatagaagtgccgctgtcaagtgtgttatctcgtatggaacaatccggagtattaatt
gacagccagcagcttaagcagcaaagccaaaccttggctaagcggattatagagctggaa
aaagcggttcatgaacaagccggcgaaacttttaatttgggttctaccaagcagctccag
caaattctgtttgaaaagctggcgataccggtattgaagaaaacacctaaaggtgcgccc
tctacatctgaggaagtgctacaggaactggctttagagtaccctattcccaagatgatt
atggattaccggggaatgacgaagctaaaaagcacctataccgataagcttccgaaaatg
ataaatcatcgcacgggacgagtgcacacttcctaccatcaagcggttaccgctaccgga
aggctttcttctaccgatcctaatctacagaacatacctattcgcactgaagagggtcga
cgcgtgcgtcaggcgtttgtgccccgtgaaggatacaaaattgttgctgcggactattcg
caaattgaactgcggataatggcgcatctctctcaggataaaggtttgctcagcgcattt
tccgaaggaaaagacattcataaagcaaccgccgctgaggtttttggtgtagcgttagaa
gacgtcacgagcgaccagcggcgcagcgccaaagcgatcaactttgggctgatttacggc
atgtctgctttcgggttgtcgcgacaactagcgataccgcgccacgatgctcagctctat
atgaatctttatttcgaacgttacccgggcgtgttgcagtatatggatgaaacccgtcag
catgccaaagaaaaaggctacgtagaaacagtacttggaagacgtttatatcttcccgac
attaaagccagtaatggtgcccgccgcaaaggtgctgaacgcgcggccatcaacgcgccc
atgcaaggcactgcagctgatattataaaaatggccatgttgaaggtcgatgaatggatt
actcaacacgctaagcaggacgtacatatgatgatgcaggttcacgatgaacttgttttt
gaaataaaagagcacttagtcgaggagtataaagagaagatcgtttctctgatgcagcaa
gcggctaatctttctgttcctcttgtagtagaagcaggagtaggagaaaactgggatgaa
gcacactaa
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