Alteromonas pelagimontana: CA267_010345
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Entry
CA267_010345 CDS
T06582
Name
(GenBank) response regulator transcription factor
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
apel
Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apel03000
]
CA267_010345
Transcription factors [BR:
apel03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CA267_010345
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_23
HTH_40
HTH_7
HTH_24
DUF6115
HTH_11
Sigma70_r4
NARF
Motif
Other DBs
NCBI-ProteinID:
QJR81150
UniProt:
A0A6M4MEU3
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Position
2322409..2323095
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AA seq
228 aa
AA seq
DB search
MNKSHKFNVFLISGSFSSDTHPTNENVQLFKNLLRTCGYDVTELTSIENLPATSNQDLIF
FDASQSEKKLSSFYRYQGCARWIMFNLLPGDIDECEAIIAGVEGTFYASDSPELLLKGLR
RLAKMDVWFKRGSINEALRRMRQQSRKQSGVSSMRPMALSSVHPKLTKREITIIELVSKG
SQNQEIADQLHISVNTVKTHIYSIFRKTQSRNRIELLSWSQDYIYELR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagtcacaaatttaacgtttttctcatttccggttcgttttcttctgatacg
caccctactaacgaaaatgtgcagttgttcaaaaatttgctaagaacatgcggctatgat
gtcactgaactgacttctattgaaaatctgcctgcgacctcaaatcaagatttaatcttt
tttgatgcgtcgcaatcagagaagaagctgtcttcattttaccgttaccagggctgtgcc
cggtggattatgttcaatttactgccgggggatattgatgaatgcgaagccattattgct
ggcgttgaaggaactttttatgcttcggattctccggagttgttgttaaaaggtctgcga
cgtttggccaaaatggatgtgtggtttaaacgagggtctattaacgaagcattgcgccgt
atgcggcaacaaagccgcaagcaaagtggcgttagcagtatgcggccgatggcgttgtca
tcggtacaccctaagttaacaaaaagggagattaccattattgaattggtatccaaaggg
tcgcaaaatcaggagatagccgatcagttgcatatcagcgtaaatacggtcaaaactcat
atatacagcatatttcgcaaaacccagtcaagaaaccggatagagctcttatcctggtct
caggactatatttacgaattacgctaa
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