KEGG   Alteromonas pelagimontana: CA267_011710
Entry
CA267_011710      CDS       T06582                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
apel  Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:apel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apel03400]
    CA267_011710
Enzymes [BR:apel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CA267_011710
    5.6.2.6  RNA 3'-5' helicase
     CA267_011710
DNA repair and recombination proteins [BR:apel03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CA267_011710
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 RRM_9
Other DBs
NCBI-ProteinID: QJR82837
UniProt: A0A6M4MIG8
LinkDB
Position
2668303..2670753
AA seq 816 aa
MLPQIFSRWFNDKGWQLRDYQLKMLKHAPNHAATLLIAPTGAGKTLSGFLPSLVSLFNSP
RQGLHTLYISPLKALTQDIHRNLEVPVADMNLPVTIETRTGDTPSYKRQRQRKKPPNILL
TTPESLMLLLSYADAPEIFGHLQTIIIDEVHSLVANKRGDFTTLALSRLHALSPNANRIG
LSATVAQPEALAAWLGKTGEPASIIKVDAPVAPAVTMLKSEARMPFGGFMARYAIPEVYA
AVEKSRTTLVFVNTRAQAELVFQMLWEENRAALPIALYHGSLSKEQRRRTESFMSAGKLR
AVVCTSALELGIDWGDVDLVIQIGAPKGVSRLLQRIGRANHRLDEPSQALLVPANRFEAL
ECQAAMDAIAQGLLDGEAPIAGAMDILPQFIVNCACSAPAMPDEIYAQVLDAPPYQGISR
QEFDKLWQFTVDGGYALRAYERYRRLVKNEEGAFYPASKRIIQRHRQNIGTIVEAGRLKV
KRIRRGNQGKIIGEVEEHFAQQLVQGDTFFFAGEVLKFEAIRDMQLHARPSKGGEPKIPS
YAGGQMPLSTFLAEGVRHILDTPENWDSLPAQVLEWLTLQSAFSRLPDKKHVLIEQFPYR
KMNYTLYYTFEGRKANQTLGMLLTRRMEKLHLKPLSFSVTDYGLSICSVEKISVTQLDEL
FQPDILGDELENWMLHAPMLKRSFRQVAVVSGLAEQNYHSTHKTMKQVTFSTDLIYDTLR
EYDPDHILLAVTRADAERELLDLKRLADMLIRFANNTVLIDLPKVSPMAIPIVLDVRSEQ
IKGAGAHALMEQADLYAEAESLMDDVRAILAGNVAS
NT seq 2451 nt   +upstreamnt  +downstreamnt
attcttccacaaatattttcccgatggttcaatgacaaaggctggcagcttcgcgattat
cagttaaaaatgttgaagcacgcaccgaatcacgccgctacgctgcttattgcgcctacc
ggcgcaggtaaaaccttatccggttttttgccatcactggtatcactgtttaactctccc
aggcaaggtttgcacaccttgtatatctccccgcttaaagcgcttacgcaggatatacat
cgcaacttagaagttcctgtcgcggatatgaacttaccggttactattgaaacccgtacc
ggcgataccccttcctacaagcgtcagcgccagcgcaagaagccgcccaatattcttctt
actacgcctgagtcattaatgcttttgctctcttatgctgatgcgcctgagatttttggt
cacctgcaaacgataattattgatgaagtgcatagcttggtggcaaataagcgcggtgat
ttcaccaccctggcattatcccgcttacatgccctttcacccaatgccaatcgtattgga
ctttccgccaccgttgcccagccagaggcgctggctgcgtggttaggcaagaccggcgaa
cccgccagtataataaaagtggatgctcccgtagcgcctgccgtaaccatgctcaaaagt
gaagcgcgcatgccgttcgggggatttatggcacgttatgcgattcctgaagtctatgca
gcagttgaaaaatcccgtaccacattagtttttgtaaatacgcgcgctcaggcagagctg
gtgtttcaaatgttatgggaagagaaccgagctgcattacctatagcgctatatcacggt
tctcttagcaaggagcaacgccgccgcaccgaaagtttcatgagtgcgggtaagctgcgc
gcggtggtctgtacttctgcgctggagctgggaatcgactggggggatgtggatctggtt
attcaaattggggccccgaaaggagtgagccgactactgcaaaggattggccgcgccaat
caccggcttgatgagcccagccaggctttacttgtccccgctaatcggtttgaagcgctg
gagtgtcaagcggccatggacgccatcgcacaaggcctgttggatggtgaagcgccaatc
gctggcgccatggacattttgccgcaatttatcgttaattgtgcatgcagtgctcctgcc
atgcctgatgaaatttatgcccaggtacttgatgcgccgccctatcaagggatttctcgg
caagagtttgacaagctttggcaatttaccgtcgatggaggctacgccttgcgtgcctat
gaacgataccggcgattggtaaaaaatgaagagggcgctttttatcctgcctcgaaaaga
ataatccagcggcatcgccagaatataggaactattgtagaagcggggcgactaaaagtt
aagcgcatccgcagaggcaatcagggtaagattatcggtgaagttgaagagcatttcgcc
caacaacttgttcagggcgataccttttttttcgccggtgaagtactgaagtttgaagct
attcgagacatgcagctacatgcgcgaccttcaaagggcggggagccaaaaatccccagc
tatgctggcggccagatgcctctatccacatttctggcagaaggggtaaggcatatattg
gatacacctgaaaactgggattccctgcctgcgcaggtactggagtggctgacattgcag
tctgcattttctcgcttacccgataagaagcatgtgcttatcgaacagtttccctatcgc
aaaatgaactatacgttgtattacacttttgaggggcgaaaagccaatcaaacgttgggc
atgttgttaacgagacggatggaaaaactgcatctgaagcctctgagtttcagtgtaaca
gattacgggctatcgatttgtagtgtggaaaaaatcagcgttacgcaattagatgaactc
tttcaacccgatattcttggagacgaactggaaaactggatgctccatgcaccaatgtta
aagcggtcattccgtcaggtggcggtggtaagtggactggctgaacaaaactaccacagc
acccacaaaaccatgaagcaggtgacgttttcaacggacctcatttacgacaccttacgc
gaatacgaccctgaccatattctgctggcggtaacgcgagccgatgcggagcgggagtta
ctggacctgaagcgtttggccgatatgctaattcgatttgcaaataataccgtgctgata
gatttaccgaaagtctctccaatggctattcctattgtgctggatgtgcgtagtgaacaa
attaaaggagccggcgcacatgcgttgatggaacaagcagatttgtatgctgaagcggaa
tctttaatggatgatgtcagggccatactggcaggaaatgtggcgtcttaa

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