Alteromonas pelagimontana: CA267_011775
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Entry
CA267_011775 CDS
T06582
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
apel
Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apel03009
]
CA267_011775 (dbpA)
Enzymes [BR:
apel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CA267_011775 (dbpA)
Ribosome biogenesis [BR:
apel03009
]
Prokaryotic type
rRNA helicases
CA267_011775 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
QJR81406
UniProt:
A0A6M4MGT0
LinkDB
All DBs
Position
2682592..2683971
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AA seq
459 aa
AA seq
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MTAFSTLSINSAILSSLDQQSLTMMTPVQCATLPDSLAGKDILAQAQTGSGKTVAFAVAA
LNKIDLTRLEPQVLILCPTRELADQVAEQIRRVGRQMPNLKVVALCGGQSIGPQIKSLQF
GCHVIVGTPGRLMDHLGKRRLALSSVKWRVLDEADRMLDMGFADDVAALFGQTDKNAQTL
LFSATYTSEIEALAKTYLSNPVVYKQEARAETQPDIEQMVYRVTPGTRKLALKAVLTHYQ
PKKAIVFCNTRLQVNEAVQDLQASGFTAGMLQGEMTQPQRTEVLVQFASDALPVLVATDV
AARGLDIADVDCVINFAVSEEPEVHIHRIGRTARAGASGKAFTLCSEEEQSFLLKIQLLM
GKDINSVGAQSLRFHANRIVEPEYVCIAAGAGKKQKLRPGDFLGSLTQDAQIPGDDIGKI
TVQSAQSYIAIKLRSVKRAMRHFREGKIKGKRVKARKVE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattttcaacattaagtatcaacagcgctattctttcttcgcttgatcagcaa
tctttaaccatgatgacgcctgttcagtgtgcaacattgccagactctctggctggcaaa
gatattctggcgcaagcgcaaacaggaagcggcaagacagtcgcttttgcagtggcagcg
ctcaataaaatcgatcttacccggctggagccacaggttttaattctttgccctacaaga
gaactggcagaccaggttgcagagcagatccggcgggtagggcggcagatgccaaacctt
aaagtggtggcattgtgcggcggccagtctattggccctcagatcaagtcattacagttt
ggttgtcatgttattgtcggtacccccggacggttgatggatcacttaggtaaacggcgg
ttagctttatcctccgtaaaatggcgcgtgctggatgaagcagatcgcatgctggatatg
ggattcgctgatgatgttgccgcgctcttcggccaaactgataaaaacgcccaaacgttg
ttgttctccgccacctatacatccgagattgaagctttagcgaaaacctatctttccaat
ccggtggtgtataagcaggaagcgcgggcggaaacccagcctgatattgaacaaatggtt
tatcgggtgacgccgggtacgcgtaagctggcgctgaaggcggtgttgactcactatcag
ccgaagaaggcaattgtgttttgtaacactcgccttcaggtgaacgaagctgtgcaggac
ttacaagcgtcaggatttactgcgggcatgcttcaaggcgaaatgacgcagcctcaacgc
actgaggtgctggttcagtttgccagtgacgccttgcccgtgctggtagctaccgatgtg
gcagcgcgggggttggatattgccgatgtggattgtgtaattaactttgcggtaagcgaa
gagccggaagttcatatccaccgaattggccgcacggcacgcgctggtgcttctggcaaa
gcatttacgttgtgtagcgaagaagagcagtcttttttgctaaaaattcagcttctaatg
ggcaaggatattaacagtgtaggagctcaaagtttacgttttcatgcgaatcgcatagtc
gaacctgagtatgtatgtattgctgcgggggctggcaaaaagcagaaactgcgcccgggg
gactttttaggatcgttgacgcaagatgcacaaattccgggtgatgatataggtaaaatt
acggtacagagcgctcaaagttacattgcaataaaattgcgaagcgtgaagcgggctatg
cgccatttcagggaaggaaaaatcaaaggaaaacgtgtaaaggcccgtaaagttgaatag
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