Alteromonas pelagimontana: CA267_011935
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Entry
CA267_011935 CDS
T06582
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
apel
Alteromonas pelagimontana
Pathway
apel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA267_011935 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apel03019
]
CA267_011935 (pcnB)
Enzymes [BR:
apel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CA267_011935 (pcnB)
Messenger RNA biogenesis [BR:
apel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CA267_011935 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QJR82840
UniProt:
A0A6M4MJS5
LinkDB
All DBs
Position
complement(2722846..2724165)
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AA seq
439 aa
AA seq
DB search
MQGYVLPRAEHGISREDISDNALKVLYRLNNAGYQSYLVGGCVRDLMLGLKPKDFDVATN
ATPEQIKSLFRNCRLIGRRFRLAHIVFGREVIEVATFRGHHAEGEDDDGALLGKQDAHGQ
LVRDNVFGTIEEDAERRDFTFNAMYYNVADFTVTDFANGRDAIAKGEVALIGDPQNRYRE
DPVRMLRAARFAAKLNMRINPATAAPIPELAHLLANIPPARLFEETLKMFLSGKGVDTFR
MLREYDLLTPLFPMLSDAIKDESSRECQFLIKVLENTDIRINSNQRVTPAFLYAALLWYP
LEEHTNKLKAESGLSDHDAFNIASGEVLHRQIQRIMIPKRFSTVIRDIWLLQQRLPRRFG
RRAYQTLSHPKFRAGYDFLLMRGQVEGGDTLELADWWTQFQYAEPGLQKTMLTNLRQTEG
ASKPPRRRRRKPKQAKGAE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
attcaagggtatgttttacctagagctgagcacggcatttcccgggaagatatcagcgac
aatgcgttaaaagttctgtatcggttaaacaacgccggttaccagtcttatctggtagga
ggttgcgtacgcgacttgatgctggggctaaaacccaaagattttgacgttgcaactaat
gctacccctgagcagatcaaaagcttgttcagaaactgtcgcttaattggccgccgcttc
cgtctggcgcatattgtatttggacgggaagtcattgaagttgcgacttttcgcggccat
cacgcagaaggtgaagatgacgatggtgcgttgcttggcaaacaagacgcccacggtcag
cttgtgcgagataacgtgtttggcactatcgaagaagacgcagaacgccgcgactttacg
ttcaacgccatgtattacaatgtcgccgactttaccgttaccgattttgccaatggccga
gacgcgatagcaaaaggcgaagtggcacttatcggcgatccgcaaaatcgctaccgcgaa
gatccagtgagaatgttgcgagctgcgcggtttgccgcgaagttgaatatgagaatcaat
cctgccacggctgcacctattccggagctggctcatctgcttgcaaatattcctccagcc
cggcttttcgaagaaacgttaaaaatgtttttgtctggtaaaggcgttgatacgtttaga
atgttgcgggagtacgacttactgacgccgctgtttccaatgctttcagacgcaatcaaa
gatgaaagcagtcgtgaatgccagttcctaattaaagtactggaaaacacagatatccgc
atcaacagtaaccaacgggtgacgccggcgtttttatatgcggcgctgctgtggtatccg
ctggaagagcataccaataagttaaaggcggaatcggggcttagtgatcacgatgccttt
aatattgcttccggagaggtgttacaccgccagattcaacggattatgatacctaagcgc
ttttctaccgtcattcgtgatatctggttgttgcagcaacgcctgcccagacgctttggt
cgcagagcgtatcaaacattaagtcatcctaaatttcgtgcaggctatgattttctgtta
atgcgcggacaggttgaaggtggtgatacgcttgagctggcagactggtggacacaattc
cagtacgccgaaccaggcctgcaaaaaacaatgctgaccaatcttcggcaaactgaaggc
gccagcaagccgccgcgccgtcgccgccgtaagcccaagcaggctaagggcgctgaatga
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