Alteromonas pelagimontana: CA267_014330
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Entry
CA267_014330 CDS
T06582
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
apel
Alteromonas pelagimontana
Pathway
apel02020
Two-component system
apel02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CA267_014330
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CA267_014330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apel03000
]
CA267_014330
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
apel02035
]
CA267_014330
Transcription factors [BR:
apel03000
]
Prokaryotic type
Helix-turn-helix
Other families
CA267_014330
Bacterial motility proteins [BR:
apel02035
]
Flagellar system
Flagellar assembly proteins
Others
CA267_014330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
HTH_50
AAA_16
AAA_5
Mg_chelatase
AAA
AAA_19
bpMoxR
AAA_7
FixP_N
Motif
Other DBs
NCBI-ProteinID:
QJR81852
UniProt:
A0A6M4MFJ4
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All DBs
Position
3256056..3257531
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AA seq
491 aa
AA seq
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MKDILLVSDNGDLIHKLETIITFLGEPCNSKSFADCASYLKSHSVDAVLIDYSIADQAKS
LVTLFPHTPFVAIQEKESDASPDCNLVNVVTLPLTYPILTQSIHRCQEYSRRKPGAGKSS
GLKTRLFRSLVGRSDEIQNVRRMVEQVAPTDATVLILGESGTGKEVVARNVHFLSARKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAENGTLFLDEIGDMPLQMQV
KLLRVLQERTFERVGGSSPLRCNVRIIAATHRDLETMIREDKFREDLYYRLNVFPIDSPA
LRDRKEDIPLLLQELISRIQGDGVDVVRFTEMAIASLMEHSWDGNVRELANLVERLSILY
PGQVVDIQDLPPKYQYGDVEAYQPDYPEELLERDAFNALFAEAAAQEDTSSSDSTEAGAA
DDQNNSQLPAEGVNLKEYLSDLEINLIIQALEQQDWVVARAADKLGMRRTTLVEKMRKYD
IQREEQISSDN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatatcctgctcgttagcgataacggcgaccttattcacaagttagagaccatt
atcacgtttttgggtgagccttgtaatagcaagtcgttcgcggactgtgctagctatttg
aaatcccattcggtggatgctgtactcatcgactattcgattgctgatcaagctaaatct
ttggttactctttttcctcatactccttttgttgccatccaggaaaaggaaagtgacgct
tcgccagattgtaatctggtgaatgtggttacgctgcctctcacatatccaatacttact
cagtctattcatcggtgccaggaatatagtcggcgcaagcctggagcgggcaaatccagc
ggtttaaaaacgcggctgttccgaagcttggtagggcgcagtgacgaaattcaaaatgta
aggcgtatggtagagcaggtcgctcctaccgatgccaccgtattgattttgggcgaatcg
ggcactggtaaagaagttgtcgcccgtaacgtgcattttttatctgcacgaaaagatggc
ccgtttattccggtaaattgcggagcaataccgggtgagttgctggaaagcgagttgttc
ggacatgaaaagggcgcctttaccggagcaattagtgcacgcaaagggcggttcgagctg
gcagaaaacggcacgttgtttcttgatgaaattggcgatatgccgttacagatgcaggtt
aagttgctgcgggttctgcaggagcgaacttttgagcgagtagggggcagtagcccgttg
cgttgtaacgttcgtattattgcagccacgcatcgtgatttggaaactatgatccgcgaa
gataaatttcgtgaagatttatattaccgcctaaacgtattccctatcgatagcccggcg
ttacgagatcgcaaagaagatatcccgctgttgttacaggaacttatcagtcgcattcag
ggggacggtgtagacgttgtccgatttaccgaaatggccattgcatcattaatggagcat
agttgggatggcaatgtaagggaactcgccaatcttgtagagcgcctgagtattctctat
ccgggccaagttgttgatatacaagatttaccacccaaatatcagtatggtgatgtagag
gcctaccaacccgattatcctgaggagcttcttgagcgtgatgcttttaacgcgttgttc
gcagaggctgctgctcaggaagacacttcctccagcgatagcactgaagccggggccgct
gacgatcaaaataattctcagttgcctgcagaaggtgtaaatcttaaagagtatttatct
gatcttgaaatcaatttaattatccaggcattggaacagcaagattgggtggtggcacgg
gctgcagacaagctggggatgcgcagaaccaccttagttgaaaaaatgcgtaaatatgat
attcaacgtgaagaacagatctcgtcagataattga
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