KEGG   Alteromonas pelagimontana: CA267_015555
Entry
CA267_015555      CDS       T06582                                 
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
  KO
K03530  DNA-binding protein HU-beta
Organism
apel  Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:apel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apel03032]
    CA267_015555 (hupB)
   03036 Chromosome and associated proteins [BR:apel03036]
    CA267_015555 (hupB)
   03400 DNA repair and recombination proteins [BR:apel03400]
    CA267_015555 (hupB)
DNA replication proteins [BR:apel03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CA267_015555 (hupB)
Chromosome and associated proteins [BR:apel03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CA267_015555 (hupB)
DNA repair and recombination proteins [BR:apel03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CA267_015555 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: QJR82065
UniProt: A0A6M4MHL0
LinkDB
Position
3532327..3532599
AA seq 90 aa
MNKSQLIDQIAAGADISKAAAGRALDAFTDAVTAALKDGDQVALVGFGTFAVRERSARSG
RNPQTGETIQIAAAKVPSFKAGKALKDACN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtctcaactcatcgaccaaatcgctgctggtgcagatatttctaaagcagcc
gctggccgcgctttagatgcgtttactgatgcagtaactgcagcgctaaaagacggtgac
caagttgcactggtaggtttcggtactttcgcagttcgcgagcgttcagctcgtagcggc
cgtaaccctcaaactggtgagactattcagatcgcagcagctaaagttccttctttcaaa
gcgggtaaagctctgaaagacgcttgtaactaa

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