Alteromonas pelagimontana: CA267_016685
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Entry
CA267_016685 CDS
T06582
Name
(GenBank) pectate trisaccharide-lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
apel
Alteromonas pelagimontana
Pathway
apel00040
Pentose and glucuronate interconversions
apel01100
Metabolic pathways
apel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CA267_016685
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CA267_016685
Enzymes [BR:
apel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CA267_016685
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
RicinB_lectin_2
Ricin_B_lectin
Motif
Other DBs
NCBI-ProteinID:
QJR82270
UniProt:
A0A6M4MI47
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Position
complement(3777351..3779360)
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AA seq
669 aa
AA seq
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MKFNLPAKLTKITMIFASLGFTANAFADGYHTQNGGTTGGAGGNVVYATTGTQIHEALCS
RASSDTPLIIEVEGTINHGNTTKVSGDSCNTAADKIELKEISNVTLIGVGNGALFDELGI
HIRSASNIIIRNVHVRNVKKSGSPTSNGGDAIGMESNVSNVWVDHVTLEASGGESEGYDA
LFDLKGTSKYVTLSYSILRNSGRGGLVGSSDSDDNNGPVTYHHNYYQNINSRTPLLRHAT
AHSYNNYFNGIQSSGMNPRIGGQIKAEHNYFENANNPLGTFYTDDMGYWEVNGNIWGANV
VWTEEDSGNHPAGPNPSSTTSISIPYSYQLDDASCVPALILATAGADTQMAESDGSCSVT
GGGDNGNGDNGGDGDNGGGDNGGGGDSGTNLAIGAGADGSSKASGTSYGNVIDGNVDTFW
SPSGSTGTINVKNLGSEVSAARIVESAGAEGRITAWSLVNYDTGVVLASGNSVPDVVTFN
AVTLNKLSFVISAATGTPQIAEFEVYASSTGSGNSNGNSSSQHNSIVSGTYRIAPVHSGQ
TLDVTNCASVNGVNVRQWSWLNNECQQFIITPVDDIWHRVSPVNAPNLALEVDSSSTTSG
ANVMLWEYWGGYNQQFRFQSAGNGKWRLVNRNSELCLDIEGASATEGANLIQWTCTAGRE
NQMFELISQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaacttacctgcgaaacttaccaaaattacgatgatttttgccagtcttggc
tttacagctaacgcctttgccgatggctaccatacacaaaacgggggaacgaccggaggt
gcgggcggtaatgttgtctatgcgacaaccggaacccagattcatgaggcgctctgtagc
agagcatcaagtgacactcctctcattattgaagtggaaggtacgatcaatcatggaaat
accaccaaagtttcaggagatagctgcaatacggctgctgataaaattgagcttaaagaa
atcagtaatgtcacgctaattggcgtgggcaacggcgctcttttcgatgaactaggcatc
cacattcgaagtgcgagtaacatcattattcgaaacgtgcacgtaagaaacgtcaagaaa
tccggctcgccgacctctaacggcggagatgcaataggcatggaatcaaatgtcagcaac
gtttgggtagaccacgtcacactggaagccagtggcggcgaaagtgaaggatatgacgca
cttttcgatcttaaaggaacgtcgaaatacgttaccctttcctacagtatattgcgtaac
tccggcagaggcggcttagttggctcaagcgatagcgatgacaataacggcccggttacc
taccatcataattattaccaaaacattaattccagaacgcctcttttacgtcatgccact
gcccattcttacaacaactattttaatggcatccagtcttcagggatgaatcctcgaatc
ggcggccagattaaggctgaacacaactattttgaaaatgcgaacaacccgcttggcacc
ttctacactgacgacatggggtactgggaagttaacggaaatatttggggagccaatgta
gtctggactgaggaagacagcggtaatcaccctgcgggtcccaatcccagctcaacaaca
tcaattagtattccatacagctatcagcttgatgatgcgagttgcgttcctgcactcatt
cttgctactgcaggcgccgatacgcaaatggctgaatcggacggtagttgctcggtgact
ggcggtggcgataatggaaatggcgacaacggcggcgatggcgataacggaggtggtgac
aatggcggcggtggcgactcaggtactaatctggcaatcggtgccggcgcagatggaagt
tcaaaagcaagcggaaccagctatgggaacgtaatcgacggcaacgtagatacattttgg
tcgccgtcaggatctacaggtaccattaatgtaaagaacctgggctcggaagtcagtgct
gcacgtatagtggaatcggctggcgcagaaggcagaattaccgcctggtcacttgttaac
tacgataccggcgtagttttagcttccggcaacagcgtgccggacgtagttaccttcaat
gccgttacacttaataaactcagttttgtcatttctgcggcaacaggtacgccacaaatt
gctgaattcgaagtgtatgcatcttctacaggttcaggtaattctaatggtaacagtagt
agccagcacaacagtattgtcagcggcacgtaccgaatcgcccccgttcacagcggccaa
acgttggatgtgactaattgtgcatcagtaaacggcgtaaatgttcgccagtggagttgg
ctcaacaatgagtgccagcaattcattattacacctgttgatgatatttggcacagagta
tcacccgttaatgcccctaacctggctctagaggtagattcatccagcacgacgagcgga
gccaacgtaatgctttgggaatactggggcgggtacaaccaacagtttaggttccaaagt
gcgggtaacggaaaatggcgactggttaaccgcaatagcgagctatgtcttgatattgaa
ggagcatcggcaactgagggcgcgaacctcatccaatggacgtgtaccgcaggcagagaa
aatcaaatgtttgaactgatttctcagtaa
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