Alteromonas pelagimontana: CA267_017055
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Entry
CA267_017055 CDS
T06582
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
apel
Alteromonas pelagimontana
Pathway
apel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CA267_017055 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apel03400
]
CA267_017055 (recC)
Enzymes [BR:
apel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CA267_017055 (recC)
DNA repair and recombination proteins [BR:
apel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CA267_017055 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QJR82336
UniProt:
A0A6M4MJS4
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All DBs
Position
3865172..3868465
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AA seq
1097 aa
AA seq
DB search
MWFILLALYPSNKLEHLSYLLGALLEQQPGHIFSPQTILVENPGMQHWLNMELAQQKGIA
MNLAFPLPTRFMWNTARAVLGKDVVPQQSAYRREVLVWRIENILRSDTFCHSPETEKACR
YWQHLADAEEQGVQRLQFATALADIFEQYLLYRPDWLFSWEQGELVLNSEDEIWQSLIWR
HLVAQSPLHPARLHKMAIDALQQDCEITLPARVIAFAINTMAPQLVQFFDALAKYTDIHI
FHLNPSVNYWGDVKSDRERARLLRQQGVTQWQLDQQDNPLLANLGKQGRDLFNLLTSVDT
FEISGFDVPAQQGNTVPTGYLHAVQQDILQATAPSRTVPVSQEDNSIIIARAHSSLREVQ
GLHDQLLHLMNNNSGIKPADVVVMCPAIEDYAPLIDAVFHRIGTPSTDNSGAPRVPCSIA
DRSPLDSEPLIASFISLLSLPDSRFEVSKIMDYLRLDALQAKFSLTSDDLDSMSYWLQQA
KVHWGVDSHHKSVITHGATDSFLHSWSWGLKRLLMGMVFADEEKISHDILTVPDVEGQQT
VVLGKLIHLLDQLGHYCTQLKKTRTPEQWREFLTELREACFSPLPEQQDTWETLERATAD
LEHHCREAGFVGDLSLRQVREVLLKRFSSPDVGNHFMTGQVTFCSMLPMRSIPFKVVCIL
GLNDGEFPRQSQPISIDLMPKNAARIGDRSRRMEDRYLFLEALISARDYLYLSYQGNSEK
DNSERQPSLVLAELLDVLERGYGFDSKIQQRQLPLHPFSAGNFSADFISFEPGWYRLAES
ISTASKPARTTFAPLEEPRLPETVSVQQIARCLRHPLQYFANQVLGVRLDNQQPDLSDAE
PFAESPLIRYQVMDALVNTCVEQNNTATVLTRYQLSGELPATPLTATLLERWNTASEALG
EALALTHSDAIVASWQGHQCTVEAKAWTDGLTLKHMHVGKQHVQRLLSQFLTMLVFNASG
RALPLEAYYLSWKSDKFTIRRASFSAFSSEEAQHLLAQYEAVFTKAHQGPYLGFADIAIA
ALNAAQDQLLSDWVTTPKATQMWQQLAEGQSQQQKGLNEDDYVKWFYPNGIALTDIPLAD
IEALFLPLMQCHGDKKR
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttattttgctcgcactatacccctcaaacaaactggaacatctcagttattta
ctgggtgcgttgttagaacaacaacccggtcatatttttagtccgcaaaccattctggtg
gaaaatccaggtatgcagcattggctgaacatggagttggcccagcaaaaagggattgca
atgaatctggcatttccgctgccaacccggtttatgtggaatactgcccgcgcggtgttg
ggaaaagatgtggtccctcaacaatcggcatatcggcgtgaagtgctggtttggcgaatt
gaaaatatcctgcgcagcgatacattttgccactcaccagaaaccgaaaaagcgtgccgc
tattggcagcatctggctgatgctgaggagcagggggtgcagcgtttgcaattcgctact
gcgttggctgacatttttgagcaatatttattgtatcggcctgattggctattttcctgg
gagcagggtgaacttgtattaaatagtgaagatgaaatctggcaatcactgatatggcgc
cacctggttgcccaaagcccgcttcacccggcgcgcctgcacaagatggcgattgatgcg
ttgcagcaagattgtgagataacgttgccagccagagtcattgcgtttgctattaatacc
atggcgcctcaactggtgcagtttttcgatgcactggcaaaatacactgatattcatatt
tttcatttaaacccaagcgttaactattggggggatgtgaaaagcgacagagaacgggca
aggctgttgcgtcagcagggcgtaacgcagtggcaattagatcaacaggataatccgctg
cttgcaaacctaggcaaacaagggcgcgatctttttaatcttctcaccagcgttgatacc
tttgaaatcagcggctttgacgttcctgcccagcaaggtaataccgtgcccacaggttat
ttacatgcggtgcagcaagatattttgcaggcgacagcgccgtcgcgcacggtacccgta
tcacaagaagataacagtattattattgccagagcgcatagttcgttaagggaagttcag
ggcttacatgaccaactccttcatttaatgaacaacaacagtggaattaaacctgctgat
gtggtggtaatgtgccccgctattgaggattatgctccgctcattgatgcggttttccac
cgcattggcacaccgtctacggataattccggcgcaccacgggtcccctgttccattgcc
gatcgttcaccactggattcagaacctttaattgcctccttcatcagtttgctcagcctt
ccggatagccgattcgaggtgagcaaaattatggattatctgcgtcttgatgcgcttcag
gccaagttttctcttaccagtgacgatcttgattcgatgagctattggctacaacaggcc
aaggttcactggggggtagatagtcaccataaaagcgtgattacacacggtgctacagac
tcctttttacattcctggtcatggggactgaagcgtttattgatggggatggtgtttgct
gatgaagagaaaatttctcatgatattcttactgtgccggacgtggaaggtcagcaaaca
gtggtgctggggaagctgattcacttactggatcagcttggccattattgcacacagcta
aaaaagaccagaacgcctgagcaatggcgtgaatttttaacagaattacgagaagcctgt
ttttcgccattaccagaacaacaggatacctgggaaaccttagaaagggctactgcggat
ttagagcatcactgccgcgaagctggtttcgtcggcgacctgtcacttcgtcaggttcga
gaggttctgcttaaacgcttttcttcaccagatgtaggcaatcattttatgacggggcag
gtaacattctgttcaatgctgccaatgcgcagtattccgttcaaagtagtatgcatttta
ggattaaatgatggggaatttccacgccagtctcaacctatcagcattgacttgatgcct
aaaaatgcagccagaattggtgaccgctcgcggcggatggaagaccgctatctgtttctg
gaagcgctgatttctgcacgggattatctttacctgagctatcagggaaacagtgaaaaa
gataacagtgagcgccagccgagtttagtattggctgaattgcttgacgtgcttgagcga
ggctatgggttcgacagcaaaattcagcagcgacaattgccactacacccttttagcgcc
ggcaatttttctgcggattttatcagcttcgagccgggctggtaccgccttgctgaatcg
atttcaactgccagtaagccggcccggacgacctttgctccactggaagaaccacggctg
ccagagacagtttctgttcagcagattgctcgttgcctgcgccatccgctgcaatatttt
gcaaatcaggttttaggtgtgcgtctggataatcaacagccagatttaagtgatgcagaa
ccctttgccgaaagccctttaattcgatatcaggtaatggatgccttagtaaatacctgt
gttgagcagaacaataccgctacggtactgacgcgctatcagcttagcggagagctgccg
gcaacgccattaactgctaccttgctggaacgttggaatactgcatctgaagcgttaggt
gaggcgctggcgttaactcacagcgatgctattgttgccagttggcaaggacaccaatgt
actgttgaggcaaaggcttggactgatggcctgactctcaagcatatgcatgtaggtaag
cagcacgttcagcggttgctgtctcagtttttaaccatgctggtatttaatgccagcggc
cgcgcgcttcccttggaagcttattacttaagttggaaaagtgacaaattcactattcga
cgcgccagctttagcgctttttcttccgaagaggcacaacacttattagctcagtatgaa
gcggtatttacaaaggcgcatcaaggcccctaccttggctttgctgatattgctattgcc
gcgttaaatgctgctcaagatcagcttttatccgattgggtgacgacacccaaagcaaca
caaatgtggcagcaattggctgaaggccagtcacagcagcaaaagggcttaaatgaagat
gattatgttaaatggttttatcccaacggcattgcactgaccgatattccgcttgcggac
atagaagcgctatttctaccgctgatgcaatgtcatggagacaaaaaacgatga
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