Alteromonas pelagimontana: CA267_017975
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Entry
CA267_017975 CDS
T06582
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
apel
Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apel03009
]
CA267_017975 (rimO)
Enzymes [BR:
apel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CA267_017975 (rimO)
Ribosome biogenesis [BR:
apel03009
]
Prokaryotic type
ribosomal protein modification factors
CA267_017975 (rimO)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QJR82931
UniProt:
A0A6N3IX55
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All DBs
Position
complement(4077474..4078901)
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AA seq
475 aa
AA seq
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MTVKTYRPNQTTTMEIPVKTLQENRSAAPALGSRIGFVSLGCPKNLVDSERILTQLRTEG
YDVVPTYQDADLVIVNTCGFIDSAVEESLDTIGEALKENGRVIVTGCLGIKDDEIREVHP
NVLAITGPHAYEEVVEQVHTHLPKPEHNPYLHLIPDQGIKLTPRHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPVGEVLDEAKRLQAAGVNELLVISQDTSAYGVDVKHRTGFWNGMPV
KTHMQQLCEKLGELDMWVRLHYVYPYPHVDDLIPLMNEGKILPYLDIPFQHASKRILRLM
KRPGSADRTIERVKRWRELCPELIIRSTFIVGFPGETEEEFEELLQFLQEAQLDRVGCFT
YSAVDGAKANDLPDPVPEDIKQARLARFMEVQGKISAARLQQRIGKEYQIVIDSVDSEGA
TGRTYADAPEVDGVVHLNGVYHLKPGERVWAEIIHADEHDIWGVLSDDEEDSLLN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaaaacctatcgcccgaatcaaactaccacaatggaaatccctgtaaaaacg
ctacaggaaaaccgttcagctgcacctgctttgggctcgagaatcggtttcgtcagtctc
ggctgcccaaaaaatttagtcgattctgagcggattcttacacaattacgcaccgaaggc
tacgatgtggttcccacttatcaagatgccgatctggtcattgtaaacacttgcggattt
attgactctgcggtggaggaatcgcttgatactatcggtgaagcacttaaagaaaacggg
cgggtgatagtcaccggctgcttgggaataaaggatgacgaaatacgtgaagtccatcct
aatgttcttgctatcaccggccctcacgcttatgaggaagtggtggagcaggtgcatacg
catttgccgaaaccagaacacaatccctatctgcacttgatccctgatcaaggtattaag
ttaacgccgcgacactacgcctatttaaaaatttccgaaggatgtaatcaccgctgtacg
ttttgtattataccgtctatgcgaggcgatctggtaagtcgtcccgtgggcgaagtttta
gatgaagcaaaacgtttgcaggccgcaggagttaacgagcttttagtgatttcgcaggac
actagtgcctatggcgtagatgtaaaacatcggaccggcttttggaatggtatgccggta
aaaacgcacatgcagcaactttgtgaaaagctgggggaattagacatgtgggtgcgtctg
cattacgtgtatccctatcctcatgtggacgatctcattccgctaatgaatgaaggcaag
atcctgccttacctagatattcctttccaacatgccagcaaacgaattttacgcctgatg
aagcgtccagggagtgcagacagaaccattgaacgcgtaaaacggtggcgagaactgtgc
cctgaacttattatccgttccactttcatagtgggctttcctggtgaaactgaagaagaa
tttgaagagttactccagtttctgcaagaggcgcaactagaccgcgtaggctgttttacc
tattccgccgttgacggcgcaaaagccaacgatttacctgatccggttcctgaagatatt
aaacaggctcgtttagcaagatttatggaagttcaagggaaaatttctgcagctcgcttg
caacaacgcataggcaaagaatatcaaatagtcattgattcagtagatagtgaaggcgca
acaggaagaacctacgcagatgcaccagaggtggacggtgtggttcatcttaatggtgta
tatcatctcaaacccggtgaaagagtatgggctgaaatcattcatgctgacgaacatgat
atctggggcgtactgtcggacgatgaagaagatagtttactcaattaa
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