Acetobacter persici: A0U91_03280
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Entry
A0U91_03280 CDS
T04751
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
aper
Acetobacter persici
Pathway
aper02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aper00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A0U91_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aper03021
]
A0U91_03280
Transcription machinery [BR:
aper03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A0U91_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC37_C
Mat89Bb
Motif
Other DBs
NCBI-ProteinID:
AQT04181
UniProt:
A0A1U9LCM1
LinkDB
All DBs
Position
complement(722571..724553)
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AA seq
660 aa
AA seq
DB search
MATKTASGNGAHSAEQDGDATTLDTQSAAVKKLIAKGRERGHITFDELNAVLPQDKMSSE
QIEDIMAMLSEMGIQVVENEESDDSDSQKSEKAEDEEAEDDAEEAETETASGNVNAENLG
RTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTFRAIISWHEKIR
NNEMLLRDIVDLEAMQAATNPMGEEGTGDAFENAEGETEDADEPENEAEGEVEGEGSGLS
LSALEEKLKPEILAHFEDIEPLYEKLRKLQVRRIDVLTTGEEVQDRSEQIYAALRDELVG
KVEQVHLHNNRIEDLVIQLKELFRTLNVLEGRMLRLAESCRVSREDFLLKYRGRELDPAW
MDMVSALPGKSWKNFVAKHSETVIDLRNQVAQLAQDTGLPIGEFRRVYATVARGERDSAR
AKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWW
IRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEKV
RKVLKIAKEPISLETPIGDEEDSHLGDFIEDKTAIIPLDAAIQTNLREATTRVLASLTPR
EERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaagacagcatcgggtaacggagcgcactcagctgagcaggatggtgacgcc
accactctggatacgcagtctgccgcggtcaaaaaactgatcgcgaaggggcgtgagcgt
gggcacatcacgtttgacgagctgaacgccgtgctgcctcaggacaaaatgtcctccgag
cagattgaggacatcatggcgatgttgtccgaaatgggaattcaggtcgtcgagaacgag
gaaagtgacgactccgactcccagaagtccgaaaaagccgaggatgaagaggccgaggac
gacgcggaggaagcggaaaccgaaaccgcctccgggaacgtcaacgcagaaaatctcggc
cgcacggatgacccggtgcgcatgtatctgcgcgagatgggcacggtggaactgctctcc
cgcgagggtgagattgccattgccaagcgcattgaggctggccgcgatgaaatgattggc
ggcctgtgcgaaagcccgctgacattccgcgccattatctcctggcacgagaagatccgt
aacaatgaaatgctgctgcgtgacattgtggatctggaagccatgcaggcggccacgaac
cccatgggggaagagggcaccggtgacgcgtttgagaatgccgagggtgagacagaagac
gcggacgagccggaaaacgaagctgaaggcgaagttgagggcgaaggcagcggcctgtcc
ctttccgcgctggaagaaaagctgaagccggaaatcctcgcgcattttgaagatatcgag
ccgctgtacgaaaaactgcgcaaacttcaggtccggcgcattgatgtgctgaccaccggc
gaggaagtgcaggaccggtccgagcagatttatgccgctctgcgggatgaactagtgggc
aaggttgagcaggtgcacctgcacaacaaccggattgaagatctggtgatccagctcaag
gaactgttccgcacactgaacgtgctggaaggccgtatgctgcgtctggcggaaagctgc
cgcgtctcgcgcgaggacttcctgctgaaatatcgcgggcgtgagttggacccggcatgg
atggacatggtctccgcgctgccgggtaaatcgtggaaaaactttgtcgccaaacattcc
gagactgtgattgacctgcggaatcaggttgcgcagcttgcacaggatacaggtctgccg
attggcgagttccgccgtgtgtacgcgacggtggctcgtggcgagcgggattccgcgcgc
gccaagaaggaaatgattgaggccaacctgcgtctggtgatttccattgccaagaaatac
accaaccgcggcctgcaattccttgacctgattcaggaaggcaatatcggcctgatgaag
gccgtggataagtttgaataccgccgtggctataagttctccacctatgcgacgtggtgg
atcaggcaggcgattacccgctccattgcggatcaggcgcggacgatccgtatcccggtc
catatgatcgagaccatcaacaagctggtgcggacctcccgccagatgctgcatgagatc
gggcgggaaccggcaccggaagaactggctgaaaagctgggtatgccgctggaaaaagtg
cggaaagtgctcaagatcgccaaagagccgatttctctggaaaccccgatcggggatgag
gaagacagccatctgggtgacttcattgaggataaaacggcgatcattccgctggacgcc
gcgatccagaccaacctgcgtgaagccacaacccgcgttctggcgtctctgacgccgcgt
gaagaacgcgtgctgcggatgcgctttgggattggcatgaacacggaccacacgctggaa
gaagttggccagcagtttaacgtgacccgtgaacgtatccgtcagattgaagccaaggcc
ctgcgtaagctcaagcaccccagccgcagccgtaagctccggtccttcctggatgataac
tga
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