Achromobacter pestifer: FOC84_02515
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Entry
FOC84_02515 CDS
T09260
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apes
Achromobacter pestifer
Pathway
apes03030
DNA replication
apes03430
Mismatch repair
apes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC84_02515 (dnaE)
03430 Mismatch repair
FOC84_02515 (dnaE)
03440 Homologous recombination
FOC84_02515 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apes03032
]
FOC84_02515 (dnaE)
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_02515 (dnaE)
Enzymes [BR:
apes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC84_02515 (dnaE)
DNA replication proteins [BR:
apes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC84_02515 (dnaE)
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC84_02515 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
QKH33869
UniProt:
A0A7D4DXQ7
LinkDB
All DBs
Position
complement(457985..461479)
Genome browser
AA seq
1164 aa
AA seq
DB search
MSEEAVTTPSPFVHLRVHSEFSVVDGLVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFY
KGARGAGIKPIAGCDVWLSNDDDPGKPFRLLLLVRNHQGYLNLCELLSKAFLTNQGKGRA
EIRREWLQGQEGLIALSGGRGGDVGQALDAGNAVSALALARQWAHLFPGGYYIELQRAGM
DGDEAYTQAAMRLASEAGLPVVATHPVQFLDEFEFQAHEARVCIAEGEILANPRRVRRFS
KEQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPCLPNFPTPDGVSLDGYLVQ
LSEEGLEKRMEFLFPDEAERASKREQYYDRLRWECKTIIQMGFPGYFLIVQDFINWGKNN
GVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERV
IDYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLE
RTLKDEPAFKDRYEQEEEVRALVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQP
GQENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALALDD
AAAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVN
RKHGRAAVDYFHNDLESTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPE
EMAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYH
PTEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNFSGYRFEPVADKHTKNGKPPR
TMRYGLGAVKGTGQGAVEDILRARKEAGPFLNLFDFCRRVSKQAVNRRTIEALIKAGAFD
TIEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSGDVVAGELAKVAPWDLHKKLTEE
KSALGYYYSGHLFDAWRDEVRRIVPMQLVRVEPQRDLQWMCGVLASVRVMMTRRGKMVFA
VLDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQIYDLQLAR
EARAKSLRVKLNGSADAARLRQMLNPFRAEPENGIPGVPVDIVYTKNNFLCTVRLGEEWR
VRMADTLLANLNDWTKPDGVEVTY
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaagccgtaacaaccccgtccccatttgttcacctgcgcgtacactccgaa
ttctcggtcgtggacggccttgtgcgcatccccgacctcatcaagcgcgtggccaagctg
ggccagcccgcagtcgccttgacggatctgtcgaacctgttcggcctgatcaagttctac
aagggcgcgcgcggcgccggcatcaagcccattgccggctgcgatgtctggctgtccaac
gacgacgatcccggcaagcctttccgcctgctgctgctggtgcgcaaccaccagggctat
ctcaacctctgcgaattgctgtccaaggccttcctgacgaaccagggcaagggccgcgcg
gagatccgccgcgaatggctgcaggggcaggaaggcttgatcgccctgtcgggcggacgc
ggcggcgacgtgggccaggcgctggacgccggcaacgccgtgtccgcgctggcgctggcg
cgccaatgggcgcacctgttcccgggcggctactacatcgaattgcagcgcgccggcatg
gacggcgacgaagcctacacccaggccgccatgcgtctggcgagcgaggccggcctgccg
gtggtggcgacgcacccggtgcagttcctggacgagttcgagttccaggcgcacgaggcc
cgcgtctgcatcgccgaaggtgaaatcctggccaacccgcgccgcgtgcgccggttcagc
aaggagcaatacctgctcagctccgaggaaatggcgcggcgctttgccgacgtgccctcg
gcgctggccaacacggtggaaatcgccaagcgctgcaacctcagcctggtgctgggcaag
ccgtgcctgcccaacttccccacgccggacggcgtgagcctggacggctacctggtccag
ctgtcggaagagggcctggaaaagcgcatggaattcctgttcccggacgaggccgaacgc
gcctccaagcgcgagcagtactacgaccgcctgcgctgggaatgcaagaccatcatccag
atgggcttccctggctacttcttgatcgtgcaagacttcatcaactggggcaagaacaac
ggcgtgccggtggggccgggccggggttcgggcgcgggctcgctggtggcctatgccctg
ggcattaccgacctggatccgatccgctacgacttgctgttcgagcgcttcctgaatccc
gagcgggtctccatgcccgacttcgatatcgacttctgccaggacaaccgcgaacgggtc
atcgactacgtcaaggaaaaatacggccgcgccgccgtgagccagattgccaccttcggc
acgctcggcgccaaggccgtggtgcgcgacgcgggccgggtgctggacatgccctacatg
ttctgcgacggcctgtccaagctgatcccgttcaacccgatggatccctggactctcgaa
cgcacgctgaaggacgagcccgccttcaaggaccgctacgagcaggaagaggaagtgcgc
gcgctggtggatctggccaagccgctggaagggttgacccgcaacatcggcatgcacgcc
ggcggcgtgctgatcgcgccgggtaagctgacggacttctgcccgctgtattgccagccc
ggccaggaaaacagcgcggtctcgcagttcgacaaggacgacgtcgaggccgccggcctg
gtgaagttcgacttcctgggcctgcgcaacctgaccatcctggactgggcggtgcgctac
gtgcgccagttcaacgaggacaagcgcgacttcgacgtcatggccctggcgctggacgat
gcggccgcctacaagatcctgtgcgacgccaacaccaccgcggtgttccagctggaatcg
cgcggcatgaaggagctgctgaagaagctgcggcccaataccttcgaagacatcatcgcc
atgctggccctgtatcgaccggggccgctggaatcgggcatggtggacgacttcgtcaac
cgcaagcacggccgcgccgcggtggattatttccacaacgatctggaaagcaccctcaag
agcacctacggggtcatcgtctaccaagaacaggtgatgctgatctcgcagatcatcggc
ggctattcgctgggcggcgccgacctgctgcgccgcgccatgggcaagaaaaagcccgag
gaaatggccaagcaccgggaactgttcgagcaaggcgccaaggaaaagggccacgacccg
gacctggcggtcaagctgttcgacctgatggaaaagtttgcgggctacggcttcaacaag
tcgcactcggccgcgtacgcgctgatttcgtaccagacggcctggctcaaggcctaccat
ccgaccgaattcctggccgcgaccatgtcctccgacatggacgacacggacaaggtccag
atcttctgccgcgatgcccaggacaacggcgtcgaggtgttgccgccggacgtcaacttc
tcgggctaccgcttcgagccggtcgccgacaagcacaccaagaacggcaagccgccgcgc
accatgcgctatggcctgggcgcggtcaagggcacggggcagggcgcggtcgaggatatc
ctgcgcgcgcgcaaggaagccggtcccttcctgaacctgttcgacttctgccgccgcgtc
agcaagcaggcggtcaaccgccgcaccatcgaagccctgatcaaggccggcgccttcgac
accatcgaacccaaccgggcggcgatgctggcttcggtgcccaccgccatggaagccgcc
gagcaggcggcccgcagcgccaaccaggcttcgctcttcggcgacgatagcggcgacgtg
gtggccggcgaactggccaaggtcgcgccctgggacctgcacaagaagctgaccgaggaa
aaatccgcgctgggctattactacagcggccacctgttcgacgcgtggcgcgacgaagtg
cgccgcatcgtgccgatgcagctggtgcgggtcgaaccgcagcgcgacctgcaatggatg
tgcggcgtgctcgccagcgtgcgcgtcatgatgacccggcgcggcaagatggtcttcgcc
gtgctggacgacggcaccgcgcaggtcgagatctcggtcttcaacgagctctacgaaaag
caccgtaaccgcttgcgcgaggaccagctcgtcatcgtccagggcaaggtcagcaatgac
gactactcgggcggcatgcgcatcgtggccgaacagatctacgacctgcagctggcgcgc
gaagcccgcgccaagtccctgcgcgtcaagctcaacggcagcgccgacgccgcccgcctg
cggcagatgctgaatccgttccgggccgagcccgagaacggcattcccggcgtgccggtc
gacatcgtctataccaagaacaatttcctgtgcacggtccgcctgggcgaggagtggcgc
gtccgcatggccgacacgctgctcgccaacctgaacgactggaccaagccggatggcgtg
gaggtcacctattga
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integrated database retrieval system
