Achromobacter pestifer: FOC84_03535
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Entry
FOC84_03535 CDS
T09260
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apes
Achromobacter pestifer
Pathway
apes03030
DNA replication
apes03410
Base excision repair
apes03420
Nucleotide excision repair
apes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC84_03535 (polA)
03410 Base excision repair
FOC84_03535 (polA)
03420 Nucleotide excision repair
FOC84_03535 (polA)
03440 Homologous recombination
FOC84_03535 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apes03032
]
FOC84_03535 (polA)
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_03535 (polA)
Enzymes [BR:
apes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC84_03535 (polA)
DNA replication proteins [BR:
apes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FOC84_03535 (polA)
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FOC84_03535 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC84_03535 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKH34058
UniProt:
A0A7D4HWY3
LinkDB
All DBs
Position
complement(669401..672118)
Genome browser
AA seq
905 aa
AA seq
DB search
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVSDHKAEYAACIFDA
RGKTFRDDLYPEYKSHRPPMPEDLAAQIEPIHRAVRALGWPVLAIEGVEADDVIGTLAKR
AAEHDVHTIVSTGDKDLAQLVNSHVTLVNTMTGEVLDEAGVVNKFGVPPDRIVDYLMLVG
DTVDNVPGVTKVGPKTAVKWLTEFGSIDKLVEGAEDIKGVAGSNLREAIPNFPLTRQLLT
VKYDCDLAGHVDAVDDLTPRPRDDATLTELYERYGFRTWLRDLTGDAERVPAGDARVAHE
APAAPVELDYQIISDWAAFDAWMEKLKDVPLVALDTETTSLDEMQARMVGMSLAVSPGVA
CYIPVAHRGPDNAPQLPKAEVLARLKPWLEDASRAKLLHHAKYDAHVFANEGIKLAGITE
DTMLQAYVLESHRGVGLNDLAQRYLGRGGVSYEDLCGKGAKQIGFDEVAVDKAGHYAAED
SDFTLQLHQVLRPMVAADEGLNRIYQLEMQVSSVLTTVERNGVKVDAAELGRQSHKLGQE
MLLLEQKAYELAGQPFNLNSPKQLGEILFGRMQLPVVRKTASGAPSTDEEVLSKLAQDYP
LPQVLLEYRGLSKLKSTYTDKLPRMINPDTGRVHTHYSQAAVITGRLASSDPNLQNIPVR
TAAGRRVREAFIAEQGMLLSADYSQIELRIMAHVSDDANLQRAFAAGEDIHRATASEVFG
VSLADVSTEQRRAAKAINFGLIYGMGVFGLASNLGITRDAAQAYIDRYFARYPGVAMYMD
DTRRRAREQGYVETVFGRRLQLPEIRGASGPRRQAAERAAINAPMQGTAADLIKMAMIAV
QDWLETEKLQTRMIMQVHDELVLEAPDAELERVKEALPRLMCDVASLRVPLVAEVGMGKN
WEQAH
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccttattactggtcgacggttcaagttacttgtaccgcgctttccacgct
atgcctgatttgcgcaacgcgcaaggcgaacccacgggggcgctctacggcgtggtgaat
atgctgcgcaaacttgtctctgatcataaggcagagtatgccgcatgtattttcgatgcc
cgcggcaagaccttccgtgacgatctctatccggaatacaagtcgcaccgcccgcccatg
ccggaagacctggccgcgcagatcgagcctatccaccgagcggtgcgcgcgctgggctgg
ccggtgctggccatcgaaggcgtcgaggccgacgatgtgatcggcaccctggccaaacgc
gctgccgagcacgacgtgcacaccatcgtgtccaccggcgacaaggacctggcgcagttg
gtcaacagccatgtcaccctggtcaatacgatgacgggcgaagtgctggacgaggccggc
gtggtcaacaagttcggcgttccgcccgaccgcatcgtggactacctgatgctggtgggc
gacacggtggacaatgttcccggcgtgaccaaggtgggccccaagaccgccgtcaaatgg
cttacggaattcggctcgatagacaagctggtggaaggcgctgaagacatcaagggcgtg
gcgggcagcaacctgcgcgaagccattcccaacttcccgctgacgcgccagctgctgacc
gtgaagtacgactgcgacctggccggccatgtggatgccgtggacgacctgacgccgcgc
ccgcgcgatgatgcgacgctgaccgaactttatgaacgctacggtttccgcacctggctg
cgcgacctgaccggcgacgccgagcgcgtgccggcgggcgacgcccgcgttgcgcacgag
gcgcccgccgcgcctgtggaactcgattatcagatcatttccgattgggccgcgttcgat
gcctggatggaaaagctgaaagacgtgcccctggtcgcgctggacaccgagaccacctcg
ctggacgaaatgcaggccaggatggtgggcatgtcgctggcggtatcgcccggcgtggcg
tgctacatcccggtcgcgcaccgcggcccggacaacgcgccgcaactgcccaaggccgag
gtgctggcgcgcctgaagccctggctggaggatgcgtcgcgcgccaagctgttgcaccac
gccaagtacgatgcgcacgtgtttgccaacgaaggcatcaagctggccggcatcaccgaa
gacacgatgctgcaggcttacgtgctggaatcgcaccgcggcgtgggcctgaacgacctg
gcccagcgctacctgggccgcggcggcgtgtcctacgaggacctctgcggcaagggcgcc
aagcagatcggcttcgatgaagtggcggtcgacaaggccggccattacgccgccgaggac
tcggacttcaccttgcagctgcaccaggtgctgcgcccgatggtggcggccgacgaaggg
ttgaaccgcatctaccagctggaaatgcaggtgtcctcggtgctgaccacggtcgagcgc
aatggtgtcaaggtggatgccgcggaactcggtcgccagagccacaagctgggccaggaa
atgctgctgctggaacagaaggcctatgaactggccggccagcccttcaacctgaattcc
cccaagcaattgggtgagatcctgttcggccgcatgcagctgccggtggtgcgcaagacc
gccagcggcgcgccgtccaccgacgaagaggtgctgagcaagctggcgcaggactatccg
ctgccgcaggttctgctggagtaccgcggcctgtccaagctgaagtccacctacacggac
aagctgccgcgcatgatcaacccggacaccgggcgggtgcacacgcattactcgcaggcc
gcggtgatcacgggccgcctggcttcgtccgatccgaacctgcagaacatccctgtgcgc
actgcagccggccggcgcgtgcgcgaggcgttcatcgccgaacagggcatgctgttgtcg
gcggactattcccagatcgagctgcgcatcatggcgcacgtctcggacgacgccaacctg
cagcgcgccttcgccgccggcgaggatatccaccgcgccacggcctccgaagtgttcggc
gtgtcgctggccgatgtctccaccgaacagcgccgcgccgccaaggccatcaacttcggc
ctgatctacggcatgggggtgttcggcctggcgtccaacctgggcatcacccgcgatgcc
gcgcaggcctacatcgaccgctatttcgcccgctaccccggcgtggcgatgtacatggac
gatacccgccgccgcgcgcgcgagcagggctacgtggaaaccgttttcgggcgccgcctg
cagctgccggaaatccgcggcgcctccggcccgcgccgccaggcggccgaacgcgccgcc
atcaacgcgcccatgcagggcacggcggccgacctgatcaagatggccatgatcgcggtg
caggactggctggaaaccgaaaagttgcagacgcgcatgatcatgcaggtgcacgatgaa
ctggtactggaagcgcccgacgccgaactggaacgggtcaaggaagcgctgccgcgcctg
atgtgcgatgtggcatccctgcgcgtgccgctggtggccgaggtgggcatgggcaagaac
tgggagcaggcccactag
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