Achromobacter pestifer: FOC84_03805
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Entry
FOC84_03805 CDS
T09260
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
apes
Achromobacter pestifer
Pathway
apes03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOC84_03805 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apes03019
]
FOC84_03805 (orn)
03009 Ribosome biogenesis [BR:
apes03009
]
FOC84_03805 (orn)
Messenger RNA biogenesis [BR:
apes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FOC84_03805 (orn)
Ribosome biogenesis [BR:
apes03009
]
Eukaryotic type
Pre-60S particles
RNases
FOC84_03805 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
pP_pnuc_1
Motif
Other DBs
NCBI-ProteinID:
QKH34109
UniProt:
A0A7D4DY37
LinkDB
All DBs
Position
complement(726372..726917)
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AA seq
181 aa
AA seq
DB search
MAVNENRLVWLDMEMTGLDPEKERIIEVAVVVTEPDLTVVAEGPVLVVHQPDSLLDAMDS
WNKSTHGKSGLIDKVKASTISEAQAEDTLLAFLAQHVPAGKSPLCGNTISQDRRFMFAYM
PRLEQFFHYRNLDVSTLKELARRWAPAVYKGFEKKSRHEALADIYESIDELKHYREHFLK
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaacgaaaaccgcctggtttggctggacatggaaatgaccggcctggatccc
gagaaagaacgcatcatcgaagtcgccgtggtggtgacggagcccgacctgaccgtcgtg
gctgaaggccccgtgctggtggtgcaccagcccgacagcctgctcgacgccatggacagc
tggaacaaatccacccacggcaagagcggcctgatcgacaaggtcaaggcgtccaccatt
tccgaggcgcaggccgaggatacgctgctggcgttcctggcgcagcacgtgccggcgggc
aagtcgccgctttgcggcaataccatcagccaggaccgccgcttcatgtttgcttacatg
ccgcgcctggagcagttcttccactaccgcaacctggacgtgagcacgctgaaggaactg
gcgcgccgctgggcgccggccgtgtacaagggcttcgagaagaagagccgccacgaagcg
ctggccgacatctacgaatcgatcgacgaactcaagcactaccgcgaacacttcctgaag
gtgtaa
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