Achromobacter pestifer: FOC84_03990
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Entry
FOC84_03990 CDS
T09260
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
apes
Achromobacter pestifer
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apes03032
]
FOC84_03990
03036 Chromosome and associated proteins [BR:
apes03036
]
FOC84_03990
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_03990
DNA replication proteins [BR:
apes03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FOC84_03990
Chromosome and associated proteins [BR:
apes03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FOC84_03990
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FOC84_03990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TetR_C_30
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QKH34146
UniProt:
A0A7D4E1I1
LinkDB
All DBs
Position
complement(765507..765866)
Genome browser
AA seq
119 aa
AA seq
DB search
MTKSELIAALAARYPQLAARDTDYAVKTVLDAMTQALASGQRIEIRGFGSFSLSQRSPRI
GRNPKSGEQVLVPGKQVPHFKAGKELRERVDLAGGNDEDAQSSGSSEPMPSMVSLHAMH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagtcggagctgatcgccgccttggcggcccgctatcctcagctggccgcccgc
gacaccgattacgcggtcaagaccgtactcgacgcaatgacccaggccctggcctcgggt
cagcgcatcgagatccgcggttttggcagcttctcgctgtcgcagcggtctccccgcatc
ggtcgcaatccgaaatccggcgaacaggtgctggtgcctggtaaacaggtgccgcacttc
aaggcgggcaaggaactgcgcgagcgggtggacttggccggcggcaatgacgaggacgct
caatcctctggatcgagtgaaccgatgccgtcgatggtgagtctgcacgccatgcattga
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integrated database retrieval system
