Achromobacter pestifer: FOC84_04350
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Entry
FOC84_04350 CDS
T09260
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
apes
Achromobacter pestifer
Pathway
apes02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FOC84_04350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apes03021
]
FOC84_04350
Transcription machinery [BR:
apes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FOC84_04350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_11
Rv2175c_wHTH
HTH_24
HTH_31
HTH_40
Motif
Other DBs
NCBI-ProteinID:
QKH34215
UniProt:
A0A7D4DV26
LinkDB
All DBs
Position
complement(850628..851161)
Genome browser
AA seq
177 aa
AA seq
DB search
MSSTLLSASAARSDAPAAPVDGLYRDHRPWLFGWLRRRLGCEHRAEDLAQDVFLRLIQGR
KAVRAGEARALLTTIARGLVVDHQRHAALERAYLAYLAAIPEVYAPSPEQQAEQLQSLAR
LDHLLDGLPPKARSAFLLSQLDGLTYPEIAQRLEVSLSSVQQYMVRAMTACYAAFDD
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttccaccctcctgtctgcatcggccgcgcgcagcgacgctcctgccgcgcccgtc
gatggcctgtaccgcgatcaccgcccctggctattcggttggctgcgccgcaggctgggt
tgcgaacatcgcgccgaagacctggcgcaggacgttttcctgcggctgatccagggccgc
aaggcggtgcgggccggcgaagcccgcgcgctgctgaccaccattgcccgcgggctggtg
gtggaccatcagcggcatgcggcgctagagcgcgcgtatcttgcctatctggccgccatc
cccgaggtctacgcgccgtctcccgaacaacaggccgagcagttgcaatcgctggcacgg
ctcgaccatttgctggacggattgccaccgaaggcgcgttccgccttcctgctgtcgcag
ctcgatgggctgacctatcccgagatcgcgcagcggcttgaagtctccttgagctccgtg
cagcaatacatggtgcgcgccatgaccgcgtgctatgcggcgttcgatgactag
DBGET
integrated database retrieval system
