Achromobacter pestifer: FOC84_07465
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Entry
FOC84_07465 CDS
T09260
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
apes
Achromobacter pestifer
Pathway
apes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC84_07465 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apes03019
]
FOC84_07465 (recQ)
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_07465 (recQ)
Enzymes [BR:
apes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOC84_07465 (recQ)
Messenger RNA biogenesis [BR:
apes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FOC84_07465 (recQ)
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOC84_07465 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QKH34793
UniProt:
A0A7D4HRR8
LinkDB
All DBs
Position
1513125..1514954
Genome browser
AA seq
609 aa
AA seq
DB search
MSDARALGVLQRVFGYESFRGDQQAIVEQVIDGGDALVLMPTGGGKSLCYQIPSLVREGT
GIVVSPLIALMQDQVDALTELGVRAAFLNSTQEWRVARDVEQAFLAGELDLLYVAPERLL
TDRCLQLLERGRIALFAIDEAHCVSQWGHDFRPEYLGLSMLHERWPDVPRIALTATATAD
TRREIAQRLSLDDARHYVSSFDRPNIRYRIIEKNEVRKQLLEMIQTDHEGESGVVYGLSR
ARVEETAEFLCNQGIDAMPYHAGLSPQVRAANQARFLREDGVVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPATAWLAYGLQDVVQQRRMIDESPGDESYRRRLG
QQLDAMLGLCETVECRRVRLLAYFGQQITACGNCDVCLEPPQAWDGTVAAQKVLSAVYRL
WKERGQRYGAGHIIDILRGKVTDRTTQHGHETLSVFGVGADLSDTAWRGVLRQLLAQGLL
TVDHEGYGTLALTEGSRAVLKGERQLMLRRESEKKPRSGKSASGRPKAAAIDLPAELQPV
FEALRAWRGEVAKSHGVPAYVIFHDATLREIALAQPESMDDLSHISGVGARKLEAYGEEI
LQRVARPVL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgcgcgccctcggcgtgttgcagcgcgttttcggttacgaatccttccgc
ggcgaccagcaagccattgtcgaacaggtgatcgacggcggcgacgcgctggtcctcatg
cccacgggcggcggcaagtcgctctgttaccaaatcccgtcgctggtccgcgaaggcacc
gggatcgtcgtgtcgccgctgatcgcgctgatgcaggaccaggtcgacgccctgaccgaa
ctgggcgtgcgcgcggccttcctgaactccacgcaggaatggcgcgtcgcccgcgacgtc
gaacaggccttcctggccggcgaactggacctgctgtacgtggcgcccgaacgcctgctg
accgaccgctgcctgcaattgctggagcgcggccgcatcgcgctgttcgccatcgacgag
gcccactgcgtgtcgcaatggggccacgatttccggccggaatacctgggcctgtcgatg
ctgcacgagcgttggccggacgtgccgcgcatcgcgctcacggcgacggccaccgccgac
acgcgccgcgaaatcgcccagcgcctgtcgctggacgacgcgcgccactacgtttccagc
ttcgaccgccccaacatccgctatcgcatcatcgaaaagaacgaggtgcgcaagcagttg
ctggaaatgatccaaaccgatcacgaaggcgaatcgggcgtggtctatggcctgtcgcgg
gcccgcgtggaagagaccgcggagttcctgtgcaaccagggcatcgacgccatgccctat
cacgcgggcctcagtccgcaggtgcgcgccgccaaccaggcgcgcttcctgcgcgaggac
ggcgtggtcatggtggccaccatcgccttcggcatgggcatcgacaagcccgacgtgcgc
ttcgtcgcgcacatcgacctgcccaaatccgtggaaggctactaccaggaaaccggccgc
gccggccgcgacggcctgcccgccacggcctggctggcctacggcctgcaagacgtggtg
cagcagcgccgcatgatcgacgaatcgcctggcgacgaatcctaccgcaggcgcctgggc
cagcagctcgatgccatgctggggctgtgcgaaacggtggaatgccggcgcgtgcgcctc
ctggcctacttcggccagcagatcacggcctgcggcaactgcgacgtctgcctggaaccg
ccgcaagcctgggacggcacggtcgcggcgcagaaagtgctgtccgccgtctatcggctc
tggaaggaacgcggccagcgctacggcgccggccacatcatcgacatcctgcgtggcaag
gtcaccgaccgcaccacgcagcatggccacgaaacgctgagcgtgttcggcgtgggcgcg
gacctgagcgacaccgcctggcgcggcgtgctgcgccaattgctggcgcaaggcttgctg
acggtagaccacgaaggctacggcaccctggccctgaccgagggcagccgggccgtgctc
aagggcgaacggcagctgatgctgcgccgggaatccgaaaagaaaccgcgctcgggcaaa
agcgccagcggccgccccaaggcagcggccatcgacctgccggccgaactgcaacccgta
ttcgaggccttgcgcgcctggcgcggcgaagtggccaagagccacggcgtgccggcttac
gtcatcttccacgacgccacgctgcgcgagatcgcgctggcccagcccgaatcgatggac
gatctgagccacatcagcggcgtgggcgcgcgcaagctggaagcctacggcgaggaaatc
ctgcagcgcgtggccaggccggtcttgtaa
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integrated database retrieval system
