Achromobacter pestifer: FOC84_07855
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Entry
FOC84_07855 CDS
T09260
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
apes
Achromobacter pestifer
Pathway
apes03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOC84_07855 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apes03019
]
FOC84_07855 (pcnB)
Enzymes [BR:
apes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FOC84_07855 (pcnB)
Messenger RNA biogenesis [BR:
apes03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FOC84_07855 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QKH34869
UniProt:
A0A7D4DZ16
LinkDB
All DBs
Position
1605193..1606554
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AA seq
453 aa
AA seq
DB search
MITETIKKFVGRLFAPAPRGPLRIARDKHGIDRRNVSRHAIKVCEVLRQHGYDAYIVGGA
VRDLIVGLEPKDFDVATNATPEQIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAPAS
EDQETDEHGRILRDNVFGSHEEDAARRDFTMNALYYDPHNEEVIDFHNGVADLKKRQVRI
IGDPAKRYREDPVRMLRAVRFAAKLNGTIDPATRQPISTMAELIENVPASRLFDEMLKLL
TCGHAMDCLRQLRADGLHKGLLPLLDVVLEQPGGEHFVELALERTDARVRSGKTISPSFL
FAALLWQQVEARWKQLRAQGEHTIPALSQAADSVLDEQTEKLAIQRRFSSDMREIWFMQP
RFERRMGKTIYRMIEQPRFRAACDFLQLRAAAGEFDSVLAQWWMDLANADDVSRGEMIEE
VARQPREAGDAPAAPRKRRRPRRSPSRGTPSAD
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgaaaccataaaaaaattcgtcggccgactgttcgcgccggcaccccggggg
ccgttgcgcatcgcgcgcgacaagcacggcatcgaccgccgcaacgtatcgcgccacgcg
atcaaggtctgcgaggtgttgcgccagcatggctatgacgcctacatcgtcggcggcgcc
gtgcgcgacctgatcgtgggcctggagcccaaggacttcgacgtggccaccaacgccacg
cccgaacagatccgtccgctgttccgccgcgcccgcatcatcggccgccgcttccagctg
gtgcacgtggtcttcggccaggaaatcatcgaaacctccaccttccgcgcccccgcctcg
gaagaccaggagaccgacgaacacggccgcatcctgcgcgacaacgtgttcggctcgcac
gaagaagacgcggcgcgccgcgacttcaccatgaatgcgctctattacgacccgcacaac
gaggaagtcatcgacttccacaacggcgtggccgacctgaaaaagcgccaggtccgcatc
atcggcgacccggccaagcgctaccgcgaagatccggtgcgcatgctgcgcgccgtgcgc
ttcgccgccaagctcaacggcaccatagacccggccacgcgccagcccatcagcaccatg
gccgagctcatcgaaaacgtgccggcctcgcgcctgttcgatgaaatgctcaagctgctg
acctgcggccatgccatggactgcctgcgccagctgcgcgccgacggcctgcacaagggc
ctgctgcccctgctggacgtggtgctggaacagcccggcggcgagcatttcgtggaactg
gcgctggaacgcaccgatgcgcgcgtgcgctcgggcaagaccatcagccccagcttcctg
ttcgccgcactgctgtggcagcaggtggaagcgcgctggaagcaactgcgcgcccagggc
gaacacaccatccccgcgctgtcgcaggccgccgactcggtgctggacgaacaaaccgaa
aagctcgccatccagcgccgcttctcgtcggacatgcgcgagatctggttcatgcagccg
cgcttcgagcgccgcatgggcaagaccatctaccgcatgatcgaacagccgcgcttccgc
gccgcctgcgacttcctgcagctgcgcgccgccgccggcgagttcgacagcgtgctggcg
caatggtggatggacctggccaacgccgacgacgtcagccgcggcgagatgatcgaagag
gtggcccgccagccgcgcgaggccggcgacgcgcccgccgccccgcgcaagcgccgccgc
ccgcgccgttcgccctcgcgcggcacgcccagcgccgactaa
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