Achromobacter pestifer: FOC84_11165
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Entry
FOC84_11165 CDS
T09260
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
apes
Achromobacter pestifer
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apes03000
]
FOC84_11165
Transcription factors [BR:
apes03000
]
Prokaryotic type
Helix-turn-helix
Other families
FOC84_11165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
HTH_8
Sigma54_activ_2
AAA_lid_14
HTH_30
AAA_5
AAA_3
Mg_chelatase
HTH_23
AAA_2
HTH_29
HTH_28
HTH_31
AAA
HTH_Tnp_1
HTH_1
HTH_IclR
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QKH35472
UniProt:
A0A7D4DX22
LinkDB
All DBs
Position
complement(2302799..2304664)
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AA seq
621 aa
AA seq
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MATQSRQHALTQARLLFNQQGAVPGGMVAEPILRSWRRCADLGFDMRGVRRAELMTQGEL
REAQQRNEALRRLSEPAMSLLRRQAGGSGGLVILSDAQGLVLDSDGDTGFAQRASRVALM
PGAPWDEAAAGTNAIGTALVEGRPIAVHGAEHYFEPNRILTCAAVPITDSEGRTLGVLDL
SSPARDLRPDVLELVRAAVDLIEHRLFEQAYEQHAVLRLHVDHAGLGAPGEGLLAFQGDL
LIGANRRALQALGLAPTALGVYRYADVFDGDMERCPDAAGRVQARSGAVYHARLRWPRSR
APQAPARPALPPAAGPRPAAPNFDAATLGALARAVHLSDAGVSILLQGETGVGKEVFARQ
LHARSQRALGPFVAVNCAALPESLIESELFGYEDGAFTGARRQGSKGLLRQAHGGVLFLD
EIGDMPLMLQSRLLRVLQTREVSPLGAARPVSVDFALVCATHRPLAHEGPDAPVRPDLYF
RIAEYTVTLEPLRARADRLELLRGLWAAQGAGPVLPPDIEAILVAYAWPGNYRQLVAVLR
TLHVLAGPAGVVDADMLPADIRGAAAAPQSTGGDADPANLQAMTDAAIHNALAAHGGNVS
RAARALGVHRSTLYRRLPRPA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccactcagtcccgtcagcacgcgctgacgcaagcgcgcctgctgttcaaccagcaa
ggcgcggtgcccggcggcatggtcgccgagcccatcctgcggtcgtggcggcgctgcgcc
gacctgggcttcgacatgcgcggcgtgcgccgcgccgaactcatgacccagggcgagctg
cgcgaggcccagcagcgcaacgaggcgctgcgccggctgtctgaacccgccatgtccctg
ctgcgccgccaggccggcggcagcggcggcttggtcatcctgtccgacgcgcaaggcctg
gtgctggactccgacggcgacaccggcttcgcccagcgcgcctcgcgcgtggcgctgatg
cccggcgcgccctgggacgaagcggcggcaggcaccaacgccatcggcacggcgctggtg
gaaggccggcccattgccgtgcatggcgcggaacactatttcgaacccaaccgtatcctg
acctgcgctgccgtccccattaccgacagcgagggccgcacgctgggcgtgctggacctg
tccagccccgcgcgcgacctgcggcccgatgtgctggagctggtgcgcgccgccgtggac
ctgatcgagcaccgtttgtttgaacaggcctacgagcagcacgccgtgctgcggctgcac
gtggaccatgccgggctgggcgcgcccggcgagggcctgctcgccttccagggcgacctg
ctgatcggcgccaaccgccgcgccttgcaggcgttgggcctggcgcccaccgccctgggc
gtgtaccgctacgccgacgtattcgatggcgatatggaacgctgccccgacgcggccggc
agggtgcaggcgcgctcgggcgccgtgtaccacgcgcgcttgcgctggccgcgttcgcgc
gcgccgcaggcgcccgcgcggccagcgctgccgcccgctgcaggcccgcgtcccgccgcg
ccgaatttcgatgccgcgaccctgggcgcgctggcgcgcgccgtgcacctgtcggatgcg
ggcgtgtccatcctgctgcagggcgaaaccggcgtaggcaaggaagtgttcgcgcgccag
ctgcatgcgcgcagccagcgcgcgttggggcctttcgtggcggtgaactgcgcggccttg
cctgaaagcctgatcgaatccgaactgttcggctacgaagacggcgccttcaccggtgcg
cggcgccagggcagcaagggactgctgcgccaggcgcatggcggcgtgctgttcctggac
gagatcggcgatatgccgctgatgctgcaatcgcgcctcttgcgcgtgttgcagacgcgc
gaagtttcgccgctgggcgcggcgcggccggtgtccgtggacttcgcgctggtgtgcgcg
acgcaccggcctttggcgcacgaagggcccgatgcgccggtgcgcccggacctgtatttc
cgcatcgccgaatacaccgtcacgctggagccgctgcgcgcgcgcgccgaccgcctggaa
ttgctgcgcggcctgtgggcggcgcaaggcgcgggaccggtcctgccgcccgatatcgaa
gccatcctggttgcgtacgcgtggccaggaaactatcggcaactggtggccgtgctgcgt
acgctgcacgtgctggcggggccggcgggcgtggtcgacgccgacatgctgcctgccgac
attcgcggcgcggcggcagcgccgcaatccacgggcggcgacgcggatcccgcaaatctg
caggccatgacggacgccgcgatccacaacgccctggccgcccatggcggcaatgtcagc
cgcgcggcgcgggcgctgggcgtgcaccgcagcacgctctatcgccgcttgccgcgtccg
gcctag
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