Achromobacter pestifer: FOC84_11590
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Entry
FOC84_11590 CDS
T09260
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
apes
Achromobacter pestifer
Pathway
apes00040
Pentose and glucuronate interconversions
apes01100
Metabolic pathways
apes02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FOC84_11590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FOC84_11590
Enzymes [BR:
apes01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FOC84_11590
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QKH35549
UniProt:
A0A7D4DZY7
LinkDB
All DBs
Position
complement(2390176..2391384)
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AA seq
402 aa
AA seq
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MKAAMNSARWLLALAMLYGGTAAAGEACRSPDEHCPSIAALLQQREGYGAQVTGGLGGKF
IDVTSDQDSGPGTLRAALAQAKKGPTWIRFASDMTIVLDTQLRVPSNTTIDGRGKRVTLI
DDGLGVYGSRNVILTHLTIDGRLSRLTQAVNVANNSRDVWVDHMDLSRMSDRLLNVKNGS
TDVTISWTKFHNSNKVMLLNNITSKNLYANYDRDSIARVTLHHNYFLNTVQRNPRAQFGT
FHLFNNLLEDWDFYGMSFSLEARALVEGNIFKNSTQRKCVEPEFFPTVEGINVNYCHYIP
IAAQRSALENGESDRGAYEKLKSQHGYTRDYKAFLRLKDNLYLGDAKPVLQDYRPESAPT
PPYCYGYEKPTPELAEKIRKFAGNTGGDTPLPVSRIGSGCPG
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgcaatgaattccgcgcgttggctgcttgccctggccatgctgtacggcggg
acggccgcggctggcgaagcgtgcaggagcccggacgagcactgtccgtccatcgcggcg
ctgctgcagcagcgcgagggctacggcgcccaggtcacggggggcctgggcggaaagttc
atcgacgtcacgtccgaccaggactcgggtcccggaacgctgcgcgccgcgctggcgcag
gcgaagaaaggacccacctggatacgcttcgcctccgacatgaccatcgtcctggatacg
cagctgcgcgtgccgtccaacacgaccatagacggacgcggcaagcgcgtcaccttgata
gacgacgggctgggcgtgtatggcagccggaacgtcatcctcacgcatctgacgatagac
gggcgcctgtcgcggcttacgcaagccgtgaacgtggccaacaacagccgcgacgtatgg
gtcgaccacatggatctttcgcgcatgtcggaccggctgctgaacgtgaagaacggctcg
accgatgtcacgatctcatggaccaagttccataattcgaacaaggtcatgctgctcaac
aacatcacctcgaagaacctctacgcgaattacgaccgcgattccatcgcgcgcgtgacg
ttgcaccacaattacttcctcaacaccgtgcagcgcaatccccgggcgcagttcggcacc
ttccatctcttcaacaatctgctggaagactgggacttctacggcatgagtttcagcctg
gaggcccgggctctggtcgaaggcaacatcttcaagaactccacgcagcgcaaatgcgtg
gagcccgaattctttccgacagtggaaggaatcaatgtgaattactgccactacattccc
atcgccgcccagcgcagcgcgctggaaaatggcgaatccgatcgcggcgcctatgagaaa
ctgaagtcccagcatggctacacccgggactacaaggccttcctgcgcctgaaggacaat
ctgtatctgggcgatgcgaaaccggtgctgcaggattaccgacccgagtccgcgccgacg
ccgccttattgctacggctacgaaaagcctacgcctgagctggcggagaagattcgcaag
ttcgcggggaacacgggcggggatacgccgttgccggtgtccaggatcgggtcgggttgt
cctggctga
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