Achromobacter pestifer: FOC84_13530
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Entry
FOC84_13530 CDS
T09260
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
apes
Achromobacter pestifer
Pathway
apes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOC84_13530 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_13530 (uvrA)
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC84_13530 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FOC84_13530 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_16
SMC_N
nSTAND1
AAA_29
RsgA_GTPase
AAA_23
AAA_25
AAA_22
nSTAND3
DnaJ_CXXCXGXG
AAA_21
NACHT
ATPase
BCA_ABC_TP_C
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QKH35906
UniProt:
A0A7D4E5G7
LinkDB
All DBs
Position
complement(2783660..2786521)
Genome browser
AA seq
953 aa
AA seq
DB search
MDVTIRIRGARTHNLKNVSLDLPRHKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSA
YARQFLQLMDKPDVDLIEGLSPAISIEQKAAGHNPRSTVGTITEIHDYLRLLYARVGTPY
CPDHGLPLQAQSVSQMVDAVLSWTPETRLAVLAPIARGKKGSYEDECASLQAQGYVRLRV
DGQMTEIDGMAPLKKTEKHDIDVVIDRLRIKPESKQRLAESFETALQLAEGRALALDMDS
GREQVFSSRYACPVCSHSLPELEPRLFSFNNPMGACPSCDGIGQVGFFDPKRVVAFPELS
LAAGAIRGWDRRNAFTHSLLTSLAAHYEFDIEAPFEELPEALRDKVLYGSGDEEISFLYL
NEKGRSTVKRHTFEGVIPNLERRWRETDSATVREELGKYRNIKTCPDCGGSRLRPEARNV
LIGQDPRGGERHGQAIYEVEAMPLSTCLTWFRDLSLTGAKQEIAQRIVREIEARLSFLNN
VGLNYLSLDRSADTISGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLQ
HLRDLGNSVIVVEHDEDMIRMADWVVDMGPGAGEHGGQVVAQGDPETVQRDPNSLTGQYL
SGARAIAIPARRPVNDELSWLTLSGASGNNLKDVELRIPSGRLVCVTGVSGSGKSTLVND
TLAVAVSRQLHHAQSEPAPYVSMLGLENFDKIISVDQSPIGRTPRSNPATYTGLFTPIRE
LFAGVPEARTRGYDPGRFSFNVKGGRCEACQGDGVVKVEMHFLPDMYVPCDVCHGKRYNR
ETLEIRYRGRNISEVLDLTVEQALEYFESVPAIARKLHTLIDVGLSYIRLGQSATTLSGG
EAQRVKLSQELSRRSTGRTLYILDEPTTGLHFRDIELLLQVLNQLVDSGNTVLIIEHNLD
VIKTADWVVDMGPEGGDGGGHVVAQGTPEDVADTPASHTGQYLGKLLRRGAGA
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgacaatacgcattcggggtgcgcgcacccataatctcaagaacgtctcgctc
gacctgccacgccacaagctggtggtcgtcacgggcttgtccggctcgggcaaatcctcg
ctggcattcgacacgctgtacgcggagggccaacgccgctacgtggaaagcctgtccgcc
tacgcccggcagttcctccagctgatggacaagccggacgtggacctgatcgagggcctg
tccccggcgatttccatcgagcagaaggcggcgggccacaatccccgctccaccgtcggc
accatcaccgagatccacgactacctgcgcctcctctacgcgcgagtcggcacgccctac
tgccccgaccacggtctgccgttgcaggcgcaaagcgtcagccagatggtggacgcggtc
ctgtcctggacgcccgagacccgcctggccgtgctggcgccgatcgcgcgcggcaaaaag
ggcagctacgaggacgagtgcgccagcctgcaggcgcagggctacgtgcgcctgcgcgtg
gacggtcagatgaccgaaattgacggcatggcgccgctgaagaagaccgagaagcacgat
atcgacgtcgtcatcgaccggctgcgcatcaagcccgagagcaagcagcgcctggcggaa
agcttcgagaccgcgctacagctggccgaaggccgcgccctggcgctggacatggacagc
ggccgcgaacaggtcttctccagccgctacgcctgcccggtatgcagccacagcctgccc
gagctggaaccgcgcctgttcagcttcaacaaccccatgggcgcctgccccagctgcgac
ggcatcggccaggtcggcttcttcgaccccaagcgggtagtcgccttcccggaactgagc
ctggcggccggcgccatccgcggctgggaccgccgcaacgccttcacccattcgctcctg
accagcctggcggcgcactacgaattcgacatcgaggcgcccttcgaggaactgcccgag
gcgctgcgcgacaaggtgctgtacggctccggcgacgaagagatctcgttcctctacctg
aacgagaaaggccgcagcacggtcaagcgccataccttcgagggcgtgatcccgaacctg
gaacgccgctggcgcgagaccgattcggctacggtgcgcgaagaactcggcaagtaccgc
aacatcaagacctgcccggactgcggcggctcgcgcctgcggcccgaggcccgcaacgtg
ctgatcggccaggatccgcgcggcggcgaacgccacggccaggccatctacgaggtcgag
gccatgccgctgtcgacctgcctgacctggttccgcgacctgagcctgacgggcgccaag
caggaaatcgcgcaacgcatcgtgcgcgagatcgaggcgcgcctgagcttcctgaacaac
gtcggcctgaactacctgtcgctggaccgcagcgccgacaccatctcgggcggcgaagcg
cagcgcatccgtctggccagccagatcggctcgggcctgaccggcgtcatgtacgtgctg
gacgagccctccatcggcctgcaccagcgcgataacgaccgcctgatcggcaccctgcaa
cacctgcgcgacctcggcaacagcgtcatcgtcgtggaacacgacgaagacatgatccgc
atggccgactgggtcgtggacatggggccaggcgcgggcgagcacggcggccaggtggtg
gcgcagggcgacccggagaccgtgcagcgcgacccgaattcgctgaccggccagtatctc
agcggcgcgcgcgccatcgcgattccggcgcgccggcccgtcaacgacgaactatcctgg
ctgaccctgtcgggcgccagcggcaataacctcaaagatgtggaactgcgcatcccgtcg
ggccgcctggtgtgcgtgaccggggtgtccggatcgggcaagtccacgctcgtcaacgac
acgctagcggtcgccgtatcgcggcaactgcatcacgcgcaaagcgaacccgccccctac
gtgtcgatgctgggactggagaacttcgacaagatcatcagcgtggaccagagccccatc
ggccgcacgccgcgcagcaatccggccacctacaccggcctgttcacgcccatccgcgaa
ctcttcgcgggcgtgccggaggcgcgcacccgcggctacgacccgggtcgcttcagcttc
aacgtcaagggcgggcgctgcgaagcctgccagggcgacggcgtggtcaaggtcgagatg
cacttcctgcctgacatgtacgtgccttgcgacgtttgccacggcaagcgctacaaccgc
gaaacgctggaaatccgctatcgcggccgcaacatcagcgaagtgctggatctgacggtc
gagcaggcgctggagtacttcgagtccgtgccggccatcgcccgcaagctgcacacgctg
atcgatgtgggcctgtcctatatccggctgggccagagcgcgaccaccctgtcgggcggc
gaagcgcagcgcgtgaagctgtcgcaggaactgtcgcggcgcagcaccggccgcacgctc
tacatcctggacgaacccaccaccggcctgcacttccgcgatatcgagctgctgctgcaa
gtgctgaaccagctggtcgacagcggcaacacggtgctgatcatcgagcacaacctggac
gtcatcaagaccgcggactgggtggtcgacatgggcccggaaggcggcgacggcggcggc
cacgtggtggcgcagggcacgccggaagacgtggccgacacgcccgccagccacacggga
cagtatctgggcaaactgctgcgccgcggcgcgggcgcgtga
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