Achromobacter pestifer: FOC84_19390
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Entry
FOC84_19390 CDS
T09260
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
apes
Achromobacter pestifer
Pathway
apes02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FOC84_19390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apes03021
]
FOC84_19390
Transcription machinery [BR:
apes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FOC84_19390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_38
GerE
DUF6362
HTH_24
HTH_11
HTH_SB
TnsD
HTH_36
HTH_28
HTH_29
HTH_10
DUF722
HTH_40
HTH_Tnp_4
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QKH36986
UniProt:
A0A7D4E7H7
LinkDB
All DBs
Position
4061755..4062273
Genome browser
AA seq
172 aa
AA seq
DB search
MPTPDSPPADTVAKIYRDHHGWLSVWLRKKLGNSFDAADLAHDTFVRLMAGRRRTDAGAE
PRALLTHIAKGLVVDHWRRRALEEAYLAAVAQLPEQQAPSPEARALILETLRAIDRALRT
LSAKTREIFLMSQFDGMGYDAIAQSLGVSLSTVKRHVQAALTACLIASQADA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgcctacgcccgattctccgcccgccgataccgtcgcgaaaatctatcgtgaccatcac
ggctggctgtcggtctggctgcgcaagaagctgggcaattccttcgacgcggcggatctg
gcccacgacaccttcgtgcggctgatggccgggcggcgcaggaccgacgcgggcgccgag
ccgcgcgcgttgctgacccacattgcgaagggtctggtggtggaccattggcgccgccgg
gcgctggaagaggcctatctggccgcggtggcgcaattgcccgagcagcaggcgccttcg
ccggaagcgcgcgccctgatcctggaaaccttgcgcgccatcgatagggcgttgcggacg
ctgtccgccaaaacgcgcgagatcttcctgatgtcgcagttcgacggcatgggctacgac
gcaatcgcgcaaagcctgggcgtgtcgctgtccacggtcaagcgccatgtgcaggcggcg
ctgaccgcatgcctgatcgccagccaggccgacgcgtga
DBGET
integrated database retrieval system
