Achromobacter pestifer: FOC84_19805
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Entry
FOC84_19805 CDS
T09260
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
apes
Achromobacter pestifer
Pathway
apes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOC84_19805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apes03000
]
FOC84_19805
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_19805
Enzymes [BR:
apes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FOC84_19805
Transcription factors [BR:
apes03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FOC84_19805
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOC84_19805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QKH37059
UniProt:
A0A7D4HSX2
LinkDB
All DBs
Position
complement(4141884..4143329)
Genome browser
AA seq
481 aa
AA seq
DB search
MDLNHDACYSAIQVRDSRYDGRFFTVVKTTRIYCRPVCPARTPLSKNVTFYATAAAAQEA
GYHPCLRCRPETAPEVGPGHELPDDVARALQLIELGALDEDGVDVLAQRLGVGERQLRRQ
FRQHLGASPVAVAQTRRVLLAKQLIHETRLPMAEIAFASGFGSIRRFNEIFHDLFARAPG
ELRRSGKPEVSAAQEGEIKLLLRYRPPYDWDAMLAFLRLRAIPGIEQVTDDSYARTVLLD
GCQGTVTVRPGRGDALEATVRFPRLQALPAIIARLRRVFDLASDPVAIAAQFASDPVMTE
LIRARPGLRVPGAWDGFELAMRAVLGQQITVAAAIRLAGKLVAAHGAAMARPEGALTHVF
PLPEAVAAAELASLGMPRSRAATLSAVAAAAVADRHLFEAAGGLDDAVRRLRTIRGVGEW
TAQYIALRQLREPDAFPSADIGLIRALERLETRTYTPAQLLARAETWRPWRAYAAQHLWT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaccacgacgcctgctacagcgccatccaagtgcgcgactcccgttacgac
ggccgcttcttcaccgtcgtgaaaaccacgcgcatctattgccgcccggtctgcccggcg
cgcaccccattgtcgaagaacgtcacgttctatgccacggcggcggcggcacaagaagcc
ggctaccacccctgcctgcgctgccggcccgagaccgcgccggaagtcgggccggggcat
gaactgccggatgacgtcgcccgcgcgctgcagctgatcgagctgggcgcgctggacgag
gacggcgtggacgtcctggcgcagcgcctgggcgtgggcgaacgccagctgcggcgccag
ttccgccagcacctgggcgcctcgcccgtggccgtggcccagacgcggcgcgtgctgctg
gccaagcagttgatccacgagacccggctgccgatggcggagatcgccttcgcgtcgggc
tttggcagcatccgccgcttcaatgagatcttccacgacctgttcgcgcgcgcccccggt
gaactgcgccgatccggcaagccggaagtgtccgcggcgcaggaaggcgagatcaagctg
ctgctgcgctaccgcccgccctacgactgggacgcgatgctggccttcctgcggctgcgc
gcgattcccgggatcgaacaggtcacggacgacagctatgcccgcaccgtcctgctggac
ggctgccagggcacggtgacggtgcgcccgggccgcggcgatgcgctcgaggccacggtg
cgctttccccggctgcaggcgctgccggccatcatcgcgcgcctgcgccgtgtcttcgac
ctggccagcgatcccgtcgccatcgccgcgcaattcgccagcgatcccgtcatgacggaa
ctgatccgcgcgcggcccggcctgcgcgtgcccggcgcctgggacggcttcgaactggcg
atgcgcgccgtgttgggccagcagatcaccgtggccgcggccatacgcctggcgggcaag
ctggtggccgcgcacggcgcggccatggcgcggcccgaaggcgcgctgacgcacgtgttc
cccttgcctgaagccgtggcggccgccgagctggcgtcgctgggcatgccgcgcagccgc
gccgcaaccttgtcggcggtcgccgccgcggcggtggctgacaggcacctgttcgaggcc
gccggcggcctggacgacgcggtgcgccgcttgcgcaccatacgcggggtgggcgaatgg
actgcgcaatacatcgccctgcgccagctgcgcgagccggacgcgtttccgtccgccgac
atcggcctgatccgcgcattggaaaggctggaaacgcggacctacacgcccgcgcaactg
ctggcccgcgccgaaacctggcggccctggcgcgcctacgcggcgcagcacctgtggacg
gcctga
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integrated database retrieval system
