Achromobacter pestifer: FOC84_25505
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Entry
FOC84_25505 CDS
T09260
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apes
Achromobacter pestifer
Pathway
apes03420
Nucleotide excision repair
apes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOC84_25505
03430 Mismatch repair
FOC84_25505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_25505
Enzymes [BR:
apes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOC84_25505
DNA repair and recombination proteins [BR:
apes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOC84_25505
MMR (mismatch excision repair)
Other MMR factors
FOC84_25505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QKH38108
UniProt:
A0A7D4E026
LinkDB
All DBs
Position
5374706..5377000
Genome browser
AA seq
764 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQSFQILDVTDQLAAIK
RLMKANGVDDEKFPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCLREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMADFERDYARGTVIRLEQNYRSFGHILDSANALIGHNTGRLG
KNLWTEQGDGEPVRVIEQPSDGMEAQWIVDEIRSLIREGSLRREIAVLYRSNAQSRVLEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LGDAARAHDTSLYAAVALVPGKGGSNLAQFAQLIHRLIEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLSELVTAAAVFASEENYDGMPAGVVPEQDTASTLNAGVVDAPVVA
SDGLTPVAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SVLEASGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
SPKAGLAPVGSTGAGWGGGNRGDAFGRKATNTIAPRQPRGVATGVTVGDKQYRVGQGVHH
ARFGDGTIVSLSGAGQDAQAEIQFRDVGAKTLALGIAKLDIVQG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaagctcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcctggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcttcgccttttgggctgctggcggtcacgttcaccaac
aaggcggcgcgcgaaatgcttgcgcgcatgtcggccatcctgccgatcgacacgcgcggc
ctgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcaccgcgat
gccggcctgccgcaaagcttccagatcctggacgtcaccgatcagcttgcggcgatcaag
cgcctgatgaaggccaatggcgtcgacgacgaaaagtttccgccgcgcgatgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgtcctgccgacgtggaagcctacgacgcc
catcgccgccgcctgatcgagatctaccagctctacgaggcccagtgcctgcgcgagggc
gtggtggacttcgccgagctgctgctgcgcgcctacgaactgctgtcgcgcaatgcgccc
gtgcgcgagcactatcagcgccgtttccgccacatcctggtcgacgagttccaggacacc
aacacgctgcagtacaagtggctgcgccttttggccggcggcggcgccgccatcttcgcg
gtgggcgacgacgaccagtccatctatgcgttccgcggcgccaatgtcggcaacatggcc
gacttcgaacgcgactacgcgcgcggcacggtgatccgcctggagcagaactaccgttcc
tttggccacatcctggattcggccaacgcgctgatcggccacaacacgggccgcctgggc
aagaacctctggaccgagcagggcgacggcgaaccggtgcgcgtcatcgagcagccgtcc
gacggcatggaagcgcagtggatcgtggacgagatccgttccctgatccgcgaaggcagc
ctgcgccgcgagatcgccgtgctctaccgcagcaacgcgcagtcgcgcgtgctggaacac
gccatcttttccgccggcattccctacaaggtgtacggcggcctgcgctttttcgagcgc
caggaaatcaagcatgcgctggcctacctgcgcctgatggccaacccgcacgacgacacc
tcgtggatgcgggtggtcaacttccccacgcgcggtatcggtgcacgcacgctggagcaa
ttgggcgacgccgcgcgcgcgcacgacaccagcctgtatgcggccgtggcgctggtgccc
ggcaagggcggttccaacctggcgcagttcgcccagttgattcatcgcctgatcgaagag
acccgcgacctgccgctgccggaaatggtcgagcacatgctcgaggccagtggcctgaac
gcgcactacaaggccgaacgcgagggcgcggaacgcctggaaaacttgagcgaactggtt
acggccgcggccgtgttcgcgtccgaggaaaactacgacggcatgcccgccggcgtggtg
cccgaacaggacacggcctccacgctcaacgcgggcgtggtggacgcacccgtggtggcg
tccgacggcctgactccggtggccgcgttcctgtcgcatgcggcgctggaagccggcgac
aaccaggcccagcagggccaggacgccgtccagctcatgaccgtgcatgcggccaagggc
ctggagttcgacgccgtgttcatcaccggcctggaagaggggctgttcccgcacgagaac
agcgtcctggaagcgtccgggctggaagaagaacgccgcctcatgtacgtggccatcacg
cgcgcgcggcagcgcctgtacatcagcctggcgcaaagccggatgctgcatggccagacg
cgctacgcgatgcgttcgcgcttcctggacgagatccccgagcagcatctgaagtggctg
tcgcccaaggccggcctggcgccggtcggcagcaccggggcgggttggggcggcggcaac
cgcggcgacgctttcggacgcaaggcaaccaataccattgcgccgcgtcaaccgcgcggc
gtcgccaccggtgtcacggtgggcgacaagcagtatcgtgtgggtcagggcgtgcatcac
gcgcggttcggcgatggcacgatcgtaagcctgagcggagcaggacaggacgcccaggct
gaaatccagttccgcgacgtgggcgccaagaccttggcgctgggcatcgccaaactcgac
attgttcagggttga
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integrated database retrieval system
