Achromobacter pestifer: FOC84_25545
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Entry
FOC84_25545 CDS
T09260
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
apes
Achromobacter pestifer
Pathway
apes00300
Lysine biosynthesis
apes01100
Metabolic pathways
apes01120
Microbial metabolism in diverse environments
apes01230
Biosynthesis of amino acids
Module
apes_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FOC84_25545 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
apes01002
]
FOC84_25545 (dapE)
Enzymes [BR:
apes01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FOC84_25545 (dapE)
Peptidases and inhibitors [BR:
apes01002
]
Metallo peptidases
Family M20
FOC84_25545 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QKH39826
UniProt:
A0A7D4ECD6
LinkDB
All DBs
Position
complement(5385744..5386883)
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AA seq
379 aa
AA seq
DB search
MGPSSVVLDLVKDLIARPSVTPADEDCQATLVARLERIGFTCETIAQGGVTNLWARRGSA
APLAVFAGHTDVVPPGPREKWDSDPFVPTERDGYLYGRGAADMKSSIAAFVVAAEEFVAA
HPQHGGSIALLITSDEEGPSIDGTAIVCDALKARGEQMDYCIVGEPTSGDVLGDTCKNGR
RGSLSGKLTVKGIQGHVAYPHLARNPVHQLAPALADIVNIEWDQGNEYFPPTTFQVSNLN
SGTGATNVVPGEAVALFNFRFSTASTPESLQARVHEVLDRHGLEYALDWDLGGEPFLTPR
GSLTDALVSAIRDETGVTAELSTTGGTSDGRFIAKICPQVIEFGPCNATIHKVNERVEVA
SLDPLKNIYRRTLENLLLV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtgggtccatcgtcggtcgtactggatctggtcaaggacctgattgcccgcccgtccgtc
acgccggccgatgaagactgccaggcgacgctggtcgcgcgcctggaacgcatcggcttc
acctgcgagaccatcgcccagggcggtgtcaccaatctgtgggcgcgccgcggcagcgcg
gcgccgctggccgtgtttgccggtcacacggacgtggtgcctccgggtccgcgcgaaaag
tgggacagcgatccgttcgtgcccaccgagcgcgatggctacctgtacggccgcggggcg
gccgacatgaagagctcgatcgccgccttcgtggtggcggccgaggaattcgtggcggcc
cacccgcagcatggcggctcgatcgccttgctgatcacctccgacgaggaaggtccgtcc
atcgacggcaccgccatcgtctgcgacgcgctgaaggcgcgtggcgaacagatggactat
tgcatcgtcggcgagcccacctcgggcgacgtgctgggcgacacctgcaagaacggccgc
cgcggttcgctgtcgggcaagctcacggtcaagggcatccaaggccacgtggcctacccg
cacctggcgcgcaaccccgtgcaccagttggcgccggcactggccgacatcgtcaacatc
gaatgggaccagggcaacgagtacttcccgcccaccacgttccaggtgtccaacctgaac
tcgggcaccggcgccaccaatgtggtgccgggcgaagcggtggcgctgttcaacttccgt
ttctcgaccgccagcacgccggaaagcctgcaggcgcgggtgcatgaagtgctggaccgc
catggcctggagtacgcgctggactgggatctgggtggcgagcccttcctgacgccgcgc
ggttcgctgacggatgcgctggtctcggccatccgcgacgaaaccggcgtgacggccgag
ctgtccaccacgggcggcacgtccgacggccgcttcattgccaagatctgccctcaggtc
atcgaattcggtccctgcaacgccacgatccacaaggtcaacgaacgcgtcgaagtggcc
tcgctggatccgttgaagaacatttatcggcgcacgctggaaaacctcctgctcgtttaa
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integrated database retrieval system
