Achromobacter pestifer: FOC84_27165
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Entry
FOC84_27165 CDS
T09260
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
apes
Achromobacter pestifer
Pathway
apes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FOC84_27165
09124 Replication and repair
03420 Nucleotide excision repair
FOC84_27165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apes03021
]
FOC84_27165
03036 Chromosome and associated proteins [BR:
apes03036
]
FOC84_27165
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_27165
Enzymes [BR:
apes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FOC84_27165
Transcription machinery [BR:
apes03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FOC84_27165
Chromosome and associated proteins [BR:
apes03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FOC84_27165
DNA repair and recombination proteins [BR:
apes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FOC84_27165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
CBM_15
Motif
Other DBs
NCBI-ProteinID:
QKH39845
UniProt:
A0A7D4E2Q7
LinkDB
All DBs
Position
5735873..5738143
Genome browser
AA seq
756 aa
AA seq
DB search
MSYAVAVRALCEFTARAGDLDLRFTPAPSGLEGMAGHAAVTGRRGPDYETEVALSGQHEN
LLVRGRADGYDPVAKQLEEIKTYRGQLDSVRDNHRAVHWAQAKVYGHLLCQARGLASLRV
ALVYYNVVTEEETLLVETHEAAALEVFFREQCGRFLAWAATELAHRQSRDAALEKLKFPH
GEFRAGQRELAVAAYRKARDGGCLMAQAPTGIGKTLGTIFPLLKASPGAGLDKIFFLAAK
SPGRGLALEALDTVNAQPAAPGLRVLDLQARDKTCVHPDLACHGESCPLAQGFYDRLPQA
REAALTHARLDAATVAAAAREHQVCPYYLSQELIRWSDVVVGDYNYYYDATAMLYAMTQV
YQWKVAVLVDEAHNLVDRARCMYTGELDQASLAAARYAAPKALKKSLDGLQRSWNALNKK
QAERYQAYDEVAAGVLAAVQKAVGAIMEHMAETPLPQDDPVLGFYFEALQFMRLAEQFGS
HALFDVTLSDASSAGAKTPPSVLCVRNVIPAPYLAARYAGAHATVLFSGTLSPQQFYRDT
LGLPAATPWLDVAAPFQAEQLAVRVVGNVSTRYRDRERSLQPIVELIARQYAERPGNYLG
FLSSFDYLRQVSDLMRERHPSVPIWLQTPGMDEAGRAAFLARFTETGQGVGFAVLGGAFS
EGVDLPGRRLIGAFIATLGLPQVNAVNENMKRAMDQRYGVENGYDYTYLYPGMQKVVQAA
GRVIRTEHDVGTVHLIDDRYRRAKVRGLLPAWWRVE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgcggtggcggtgcgcgccctgtgcgaattcacggcgcgggcaggggacctg
gacctgcgcttcacgcccgcgcctagcggcctggaaggcatggcgggccacgcggccgtg
acgggccgccgggggccggactacgagaccgaggtggcgctgtccggccagcacgaaaac
ctgctggtgcgcggccgcgccgacggctacgaccccgtggcgaagcagctcgaagagatc
aagacctaccgcggccagctggatagcgtgcgcgacaaccaccgcgccgtgcattgggcg
caggccaaggtgtacgggcacctgctgtgccaggcgcgcggactcgcaagcctgcgcgtg
gcgctggtctactacaacgtcgtcaccgaggaagaaacgctgctggtggaaacgcacgag
gccgccgcgctggaggtgttcttccgtgagcagtgcgggcgtttcctggcctgggcggcg
acggagcttgcacaccgccagtcgcgcgatgcggcattggaaaagctgaaatttccgcat
ggcgagttccgtgccgggcagcgcgagcttgccgtggcggcctaccgcaaggcgcgcgac
ggcggctgcctgatggcgcaagcgcccaccggcataggcaagacgctgggcacaatcttc
ccgctgctcaaggccagcccgggcgcgggcctggacaagatcttcttcctggccgccaag
agcccggggcgcggcctggcgctggaggcgctggacacggtcaacgcgcagcccgccgcg
cccggcttgcgggtgctggacctgcaggcgcgcgacaagacctgcgtgcatccggacctg
gcctgccacggcgagtcctgcccgctggcccagggcttctacgaccgcttgccgcaggcg
cgcgaggcggcgctgacgcatgcgcggctggatgccgccacggtggccgcggccgcgcgc
gagcaccaggtctgcccgtactacctgtcgcaggaactgatccgctggagcgacgtggtg
gtgggcgactacaactactactacgacgccaccgcgatgctgtacgccatgacccaggtc
taccagtggaaggtggcggtgctggtggacgaggcccacaacctggtcgaccgcgcgcgc
tgcatgtacacgggcgaactcgaccaggcctcgctggcggcggcgcgctatgccgcgccc
aaggcgctgaagaagtctctggacggtttgcagcgctcgtggaacgcgctcaacaagaag
caggcggagcgctatcaggcctatgacgaggtcgcggccggcgtgttggccgcggtgcag
aaggcagtgggcgcgatcatggagcacatggccgaaaccccgctgccgcaggacgatccc
gtgctggggttctacttcgaggctctgcaattcatgcggctggccgagcagttcggttcg
cacgcgctgttcgacgtgacgctgtcggacgccagctcggccggcgccaagacgccgccc
tccgtgctgtgcgtgcgcaacgtgatccccgcgccgtacctggcggcgcgctatgcgggc
gcgcacgccacggtgctgttctcgggcacgctgagcccgcagcagttctaccgcgacacg
ctgggcctgcccgcagccacgccctggctggacgtggccgcgccgttccaggcggagcag
ctggcggtgcgggtggtgggcaacgtctccacgcgctatcgcgaccgcgagcgttcgctg
cagcccatcgtcgaactgatcgcgcgccagtacgccgagcggccggggaattatctgggc
tttctcagcagcttcgactatctgcgccaggtctcggacctgatgcgcgagcgccacccc
tcggtgccgatctggctgcagacgccgggcatggacgaggccggccgcgccgccttcctg
gcgcgcttcaccgaaaccgggcagggcgtgggtttcgcggtgctgggcggcgccttctcg
gaaggcgtggacctgcccggcaggcggctgatcggcgcgttcatagccacgctggggctg
ccgcaggtgaatgccgtgaacgagaacatgaagcgcgccatggaccagcgctacggggtc
gagaacggctacgactacacctacctgtaccccggcatgcagaaggtggtgcaggcggcg
ggccgcgtcatccgcaccgagcacgatgtgggcacggtgcacctgatcgacgaccgctat
cgccgcgccaaggtgcgcggcctgctgccagcttggtggcgggtggagtga
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integrated database retrieval system
