Achromobacter pestifer: FOC84_31425
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Entry
FOC84_31425 CDS
T09260
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apes
Achromobacter pestifer
Brite
KEGG Orthology (KO) [BR:
apes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apes03400
]
FOC84_31425 (phrB)
Enzymes [BR:
apes01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FOC84_31425 (phrB)
DNA repair and recombination proteins [BR:
apes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FOC84_31425 (phrB)
Prokaryotic type
FOC84_31425 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKH39202
UniProt:
A0A7D4ID61
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All DBs
Position
6687056..6688474
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AA seq
472 aa
AA seq
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MNTLLWLRTDLRAHDNPALAAAAEGGTVTALFLAAPGQWRLHGDAPAKVDFWLRNLRELS
RELGRLGIPLRLLTVHDWSEAPNALATFCRDHAIGQVHANAEWAVNERRRDAAVAARLRA
MGVDWTQHHGATLLRPGTVLTGKSECYRVYTPYARACRERLRTAPLRALPAPRAQTPPSW
PADPLPAAFEGFDAPAEPVRALWPAGENAASERLDAFADGIIDAYQEERDFPSLPATSCL
SPYLAAGVLSPGQALRAALAANQGEVDGGKRGAATWINELLWREFYQHLLAAYPRLSMHQ
PMKPETAAVPWRDAPDDLHAWQQGQTGIPIVDAAMRQLLALGWMHNRLRMVTAMFLSKNL
LIDWRLGEAWFMARLVDGDLAANNGGWQWSASTGADAVPYFRIFNPLSQSRKFDPDGVFL
REWLPELAHLDRRAIHDPSPMERAGAGYPLPIVDLAQSRLRALEAFSGLPPA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgctgctctggctgcgcaccgacctgcgcgcgcacgacaatcccgccctggcc
gcggccgccgaaggcggcacggtcaccgccctgttcctggccgcgcccggccaatggcgc
ctgcatggcgacgcgccggccaaggtcgatttctggctgcgcaacctgcgcgaactctcg
cgcgagctcgggcgcctgggcataccgctgcggctgctgacggtgcatgactggagcgag
gcgccgaacgcgctggccaccttctgtcgcgatcacgccatcggccaggtccacgccaat
gccgaatgggccgtcaacgaacggcgccgcgatgccgcggtcgccgcccgcctgcgggcc
atgggggtggactggacgcagcatcacggcgctacgctgctgcggcccggcacggtgctg
accggcaagagcgagtgctatcgcgtctacaccccttatgcgcgggcctgccgcgaacgg
ctgcgcacggcgccgctgcgcgccctgcccgccccgcgcgcgcagacgccgccgtcctgg
ccggcggatccgctgcccgcggccttcgaaggtttcgatgcgcccgccgagccggtgcgc
gcgctctggcccgccggcgagaacgcggccagcgaacggctcgacgcctttgccgacggc
atcatcgacgcctatcaggaagaacgcgacttcccctcgctgccggccaccagctgcctc
tcgccctatctggcggcgggcgtgctgtcgccgggccaggccttgcgcgcggcactggcc
gccaaccagggcgaagtggacggcggcaagcgcggcgccgccacctggatcaacgaactg
ctgtggcgcgagttctatcagcatctgctggccgcctaccccaggctgtccatgcaccag
cccatgaagccggagaccgcggccgtgccctggcgcgacgcgccggacgacctgcatgcc
tggcagcaaggccagaccggcatccccatcgtcgacgcggcgatgcggcagctgctggcg
ctgggctggatgcacaaccgcctgcgcatggtgacggccatgttcctgtccaagaacctg
ctgatcgactggcggctgggcgaggcctggttcatggcgcggctggtggacggcgacctc
gccgccaacaacggcggctggcagtggagcgcgtccacgggcgcggacgcggtgccctac
ttccgcatcttcaatccgctgtcgcagtcgcgcaaattcgatccggatggggtgttcctg
cgcgaatggctgccggaactggcgcacctggaccgccgcgccatccacgatcccagtccc
atggagcgtgcgggcgcaggctacccgctgcccatcgtcgacctggcccagagccggctg
cgcgcgctggaggcgttcagcggactgccgccggcctga
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