Aromatoleum petrolei: ToN1_09780
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Entry
ToN1_09780 CDS
T07150
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ToN1_09780 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apet03019
]
ToN1_09780 (deaD)
03009 Ribosome biogenesis [BR:
apet03009
]
ToN1_09780 (deaD)
Enzymes [BR:
apet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ToN1_09780 (deaD)
Messenger RNA biogenesis [BR:
apet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ToN1_09780 (deaD)
Ribosome biogenesis [BR:
apet03009
]
Prokaryotic type
rRNA helicases
ToN1_09780 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTQ35150
LinkDB
All DBs
Position
1048323..1050221
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AA seq
632 aa
AA seq
DB search
MNPSVESFAQLELSPPILDALAGIGYETPSPIQAACIPHLRAGHDLLGEAQTGTGKTAAF
ALPLLDRLDLSTRKPQVLVLTPTRELAIQVAEAFQRYAKNLPDFHVLPIYGGQSMVVQLR
QLSRGAHVIVGTPGRVMDHIERESLNLDNLKTLVLDEADEMLRMGFIDDVEWILEHVPIE
RQTALFSATMPDAIRRVAHRYLREPREVKIKTATTTVTTIRQRFCQIAVAHKLDALTRIL
EVEEEFDAAIVFVRTKTATVELAEKLEARGYAAAALNGDMTQQLRERVIEQLKGGGLDIV
VATDVAARGLDVPRISHVINYDIPYDTEAYVHRIGRTGRAGRAGSAILFVAPREMRMLKV
IERATRQPIEPLQLPSREAVADKRVAAFRQQVATVLESEDLAFFHDVVAGMEDSHNADIH
DIAAALAFLAQRERPLQLPLSTGPDIATQTAPRAERPPRENREAILERRRDFADGRLQRY
RIEVGRNQQATPKDIVGAIANEAGIESRFIGQINLYEDYSTVELPADLPHDVIDILRRVR
VRQRQLNIRPLDHDEAQRDAARPRPGPGPRFGAKPTQRGEETPRKPFAKPWDKPSGRPGG
DRPHGGKPFHGDRRDTQGTGFKPGKKKPQRDR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctccgtcgaatcctttgcccagctcgagctgagccccccgatcctcgacgcc
ctggccggcatcggatacgaaaccccgtcgccgatccaggcggcctgcatcccgcacctg
cgcgccggccatgacctgctgggcgaagcccagacggggaccggcaagacggcggccttc
gcgctgccgctgctcgatcgcctggacctctccacccgcaagccgcaggtcctcgtgctg
acgccgacacgtgagcttgcgatccaggttgcggaagccttccagcgctacgccaagaac
ctgcccgacttccacgtgctgcccatctacggtggccaaagcatggtcgtgcagttgcgc
caactgagccgcggcgcacacgtcatcgtcggcactccgggacgcgtgatggaccacatc
gagcgcgagagcctcaacctcgacaacctcaagacgctggtgctcgacgaagcggatgag
atgctgcgcatgggctttatcgacgacgtcgaatggatcctcgagcacgtcccgatcgag
cggcagactgcgctattctcggcgacgatgcccgacgccatccgtcgcgtcgcccatcgt
tacctgcgcgaaccgcgcgaggtgaagatcaagaccgccacgaccaccgtcaccacgatc
cgccagcgcttctgccagatcgccgtcgcacacaagctcgatgccctcacccgcatcctc
gaggtcgaggaggaattcgacgcggcaatcgtcttcgtccgcaccaagaccgccaccgtg
gaactcgccgaaaagctcgaggcccggggctatgccgccgccgcactgaacggcgacatg
acccagcagctgcgcgagcgggtcatcgagcagctcaagggcggcggcctcgacatcgtc
gtcgccaccgacgtcgccgcgcgcggcttggacgtgccgcgcatcagccacgtcatcaac
tacgacatcccctacgataccgaggcctacgttcaccgcatcggccgcaccggtcgcgca
ggccgcgccggcagcgccatcctgttcgtcgcgccgcgcgaaatgcgcatgctcaaggtg
atcgagcgggcaacgcgccaaccgatcgaaccgctgcaacttccctcgcgcgaagccgtc
gccgacaagcgcgtggccgccttccgacagcaggtggcaacggtgctcgaatccgaagat
ctcgccttcttccacgacgtcgttgccggcatggaggacagccacaacgccgacatccac
gacatcgcggccgccctcgccttcctggcgcagcgtgagcgccccctccagctcccgctg
agcaccggcccggacatcgccactcagaccgccccgcgcgcggagcgccccccgcgcgag
aaccgcgaggccatcctggaacgccgccgcgattttgccgacggacgcctgcaacgctac
cgcatcgaggtcggccgcaaccagcaggcgacgccgaaggacatcgtgggcgcgatcgca
aacgaagccggcatcgagagccgcttcatcggccagatcaacctgtacgaggactacagc
acggtcgaacttccggccgatctcccccacgacgtcatcgacatcctgcgtcgcgtgcgg
gtgcggcagcgccagctcaacatccgcccgctggatcacgacgaggcgcagcgcgacgca
gcacgtccccgtcccggcccgggtccgcgcttcggcgcgaaaccgacgcagcgcggcgag
gaaacccctcgcaagcccttcgcgaagccttgggacaaaccctccggcaggccgggcggc
gatcgcccgcacggcggcaagcccttccacggcgaccgtcgcgatacccagggcacgggc
ttcaaaccgggcaagaaaaagccccagcgcgatcgctga
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