Aromatoleum petrolei: ToN1_10470
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Entry
ToN1_10470 CDS
T07150
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03420
Nucleotide excision repair
apet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ToN1_10470 (uvrD)
03430 Mismatch repair
ToN1_10470 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apet03400
]
ToN1_10470 (uvrD)
Enzymes [BR:
apet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ToN1_10470 (uvrD)
DNA repair and recombination proteins [BR:
apet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ToN1_10470 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ToN1_10470 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QTQ35218
LinkDB
All DBs
Position
complement(1123744..1125963)
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AA seq
739 aa
AA seq
DB search
MSDLLANLNPEQLQAVTLPPQHALILAGAGSGKTRVLTTRIAWLVQTGQVDPQGVLAVTF
TNKAAKELLARLSGMLPLSFGHSARGMWIGTFHGLCNRLLRAHHRDAGLPQLFQILDSGD
QLAAIKRLLKALNVDDEKFPPRELQHFINAQKEAGLRPHAVEAWDDYTRRRVELFAEYEA
QCQRESVVDFAELLLRTYELLERNEPIRRHYQRRFRHILVDEFQDTNRLQYRWLKLLADD
GREGGACLFCVGDDDQSIYRFRGAEVGNMRDFEREFHVANVIRLEQNYRSHGNILDAANA
IIRHNTARLGKNLWTERGAGEPIRVFEAYADMDEARWIMEEIQSLVRDGMSRSDIALLYR
SNAQSRVLEHQLFSAGIAYRVYGGLRFFERQEIKHALAYLRLIANPDDDTAFSRVVNFPT
RGIGARSLEALQDAARTWNSSLYSTVPHLSGKPGTVLAQFVRLVEDLRRDTARLPLPELV
DHVLDASGLRDFYRSEKEGQERLENLDELINAAANFLGESGADVEALAQPHALLADFLAH
ASLEAGDHQADAGSDAVQLMTVHSSKGLEFDAVFLSGLEEGLFPHENSAVENEGLEEERR
LMYVAVTRARERLYLSFAQSRMLHGQTRYNLRSRFLEEIPEGLVKWLSPPSPRSMGARSG
AGMRVEPARGGFAPRASQAPARSQDLGGLRVGQLVTHAKFGQGVIVAAEGSGADARVQIN
FGSAGIKWLMLAVAKLSPA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctgctcgccaatctcaatcccgaacaactccaggccgtcacccttccgccg
cagcacgcgctgatcctcgccggtgccggctcgggcaagacccgcgtcctcacgacccgc
atcgcatggctggtgcagaccggccaggtcgatccgcagggcgtcctcgcggtgaccttc
accaacaaggcggcgaaggagctgctggctcgcctgtcggggatgctgccgttgtccttc
ggccattcggcccgtgggatgtggatcggcaccttccacggcttgtgcaaccgcctgctg
cgggcccaccatcgtgacgccggtttgccgcagctcttccagatcctcgattccggtgac
cagctcgcggcgatcaagcgcctgttgaaggcgctcaatgtcgatgacgagaagtttccg
ccgcgcgaactgcaacatttcatcaatgcccagaaggaagccggtctgcgtccgcatgcc
gtcgaggcctgggacgactacacgcggcgccgggtggagcttttcgccgagtatgaggcg
caatgccagcgcgagtctgttgtggattttgcggagttgctgctgcgcacgtacgagttg
ctcgagcgcaacgagccgatacgccgtcactaccagcgtcggttccgtcacatcctggtc
gatgagttccaggacacgaaccgcctgcagtaccgctggctgaagctgctcgccgatgac
ggccgcgaaggcggggcctgcctgttctgcgtgggcgacgacgaccagtcgatctatcgc
ttccgcggtgcggaagtcggcaatatgcgcgacttcgagcgcgagttccatgtcgccaac
gtgatccggctggaacagaactaccgctcgcacggcaacatcctcgacgcggcgaacgcg
atcatccgccacaacaccgcccggctgggcaagaacctgtggaccgagcgcggcgccggc
gaaccgatccgcgtgttcgaggcttatgcggacatggacgaggcgcgctggatcatggag
gagatccagtcgctggtgcgcgacggcatgagccgttcggacatcgcgctgctctatcgt
tcgaatgcgcagtcgcgcgtgctcgaacaccagctgttttccgcgggcatcgcctatcga
gtctatggcggcctgcgcttcttcgagcgtcaggagatcaagcacgcactggcctacctg
cgcctgatcgccaacccggatgacgacacggccttcagccgtgtcgtgaattttccgacg
cggggtatcggtgcacgatctctcgaagcgctgcaggacgcggcgcgcacttggaattcg
agcctgtactcaacggtgccgcacctttcgggtaagcctggaacggtgctcgcgcagttc
gtgcgcctcgtggaggatctgcgccgcgacacggcccggctgccgctccccgaactggtc
gatcacgtgctggatgcgagcgggctgcgtgatttctatcgcagcgagaaggaagggcag
gagcggctcgagaacctcgacgaactcatcaacgccgctgcgaatttcctcggcgaatcg
ggcgcggatgtcgaggcgttggcgcagccgcatgcgctgctggccgatttcctcgcccac
gcgtcgctggaggcgggcgatcatcaggccgatgccggcagcgacgccgtgcaactgatg
accgtgcattcgtcgaaggggctcgagttcgatgcggtcttcctctccgggctcgaggaa
ggcctgttcccgcatgagaacagtgcggtcgagaacgaggggctggaggaggagcgccgc
ctgatgtacgtcgccgtgacgcgggcgcgcgagcggttgtacttgagctttgcgcagagc
cgcatgttgcacggccaaacgcgctacaacctgcgctcgcgcttcctcgaggaaattccg
gaagggttggtgaaatggctctcgccgcccagcccgcggagcatgggcgcgcgcagcggt
gcggggatgcgtgtcgagcctgcgcgtggtggctttgccccgcgggcatctcaggctccc
gcacgcagtcaggacctaggggggctgcgcgtcggccaactcgtgacgcatgcgaagttc
ggccagggcgtgatcgtcgcggccgagggaagcggtgccgatgcgcgggtgcagatcaat
ttcggctcggccggaatcaagtggctgatgctggcggtggcgaagctcagccccgcatga
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integrated database retrieval system
