Aromatoleum petrolei: ToN1_19720
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Entry
ToN1_19720 CDS
T07150
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ToN1_19720 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apet03021
]
ToN1_19720 (rpoC)
03400 DNA repair and recombination proteins [BR:
apet03400
]
ToN1_19720 (rpoC)
Enzymes [BR:
apet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ToN1_19720 (rpoC)
Transcription machinery [BR:
apet03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ToN1_19720 (rpoC)
DNA repair and recombination proteins [BR:
apet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ToN1_19720 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QTQ36124
LinkDB
All DBs
Position
complement(2093596..2097825)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKSLLADLFKQTLPNEDQFDAITIGLASPDKIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMAHIELASPTAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLNRAQLLTEDDYLAKVEEYGDEFDA
LMGAEGIRGLLRTLDVQLEIEKLRGDLETTNSEAKIKKFSKRLKVLEAFQQSGIKPEWMI
LEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVG
PQLKLHQCGLPKLMALELFKPFIFNKLELMGLATTIKQAKKMVESQEPVVWDILEEVIRE
HPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCVAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYATREGVNALGEGMALSDVGELKRAYE
SKQLSLHARVSVRLKEIEVGADGERREKITRYNTTAGRAMLSEILPPGLPFSVIDKPLKK
KEISKLINASFRRCGLKETVVFADKLMQFGFRLATRAGISIAVKDMLVPTLKDSLIHAAE
QEVKEIARQYTSGLVTDGERYNKVVDIWGRAGDQVAKAMMDQLGQEDVVNRKGETVKQES
FNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITTNFREGLNVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTRGGFVMKALIEGGEVIEPLRER
ILGRVCAEDVVNPDSQETVIEAGTLLDESAVDLIESLGIDEVKVRTALTCETRYGLCGKC
YGRDLGRGNLVNVGEAVGVIAAQSIGEPGTQLTMRTFHVGGAASRAAAASGVESKSAGTI
RFAGNMRYVSNVKGEKVIIARSAEIVVADDMGRERERHKLPYGATLLVDDGAAIKAGVML
ATWDPHTRPIVTEYSGTVKFENVEEGVTVAKQIDEVTGLSTLVVIDGKRRSSGASSKGVR
PQVKLLDENGEEVKIAGTDHSVAITFQVGSLITVKDGQVIGVGDVLARIPQESAKTRDIT
GGLPRVAELFEARPPKDAGVLAEYTGTVSFGKDTKGKQRLVITEADGTAHEFLIPKDKHV
MVHDGQVVNKGELIVDGPADPHDILRLQGIEALARYIIDEVQDVYRLQGVKINDKHIEVI
VRQMLRRVVITDAGDTKFIREEQVERSEVLDENDRAEADSKLPAQYQNVLLGITKASLST
DSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHRNRRAQSAGE
DLAAEHAWAAMQEQPSEVPDGVSQDVQAG
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcctgctcgctgacctgttcaagcaaaccctgccgaacgaagaccagttcgac
gcgatcaccatcggcctcgcatcgccggacaagatccgttcgtggtcgtacggcgaggtc
aagaagcctgagaccatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgc
gccaagatcttcgggccggtgaaggactacgaatgcctatgcgggaagtacaagcgcctc
aagcaccgcggcgtcatctgcgagaagtgcggcgtcgaagtgaccttgtcgaaagttcgc
cgcgagcgtatggcgcacatcgaactggcgagcccgacggcgcacatctggttcctgaag
agcctccccagccgactcggcatggtgctcgacatgaccctgcgcgacatcgagcgcgtg
ctgtactttgaagccttcgtcgtcgtcgagccgggcatgaccccgctcaaccgcgcgcag
ctgctcaccgaggatgactaccttgccaaggtcgaggagtacggtgacgagttcgacgcg
ctgatgggcgccgagggtatccgcggcctgctgcgcacgctcgatgtccagctcgagatc
gagaagttgcgcggcgacctcgagacgaccaattcggaagcgaagatcaagaaattctcc
aagcgcctgaaggtgctcgaggccttccagcagtcgggcatcaagcccgagtggatgatc
ctcgaggttctgccggtgctgccgccggacctgcgcccgctggtgccgctggacggtggc
cgcttcgcgacctcggatctcaacgatctgtatcgtcgcgtcatcaaccgtaacaaccgc
ctcaagcgtctgctggagctcaaggcgcccgagatcatcgtgcgtaacgaaaagcgcatg
ttgcaggaagccgtcgactcgttgctcgacaacggccgccgcggcaaggcgatgaccggt
gcgaacaagcgtccgctgaagtcccttgccgacatgatcaagggcaagggtggtcgcttc
cgtcagaacctgctcggcaagcgtgtcgactactccggccgttcggtcatcgtggtcggt
ccgcagctcaagctgcaccagtgcggcctgcccaagctgatggcgctcgagctgttcaag
ccgttcatcttcaacaagctcgaactgatggggctggccacgaccatcaagcaggcgaag
aagatggtcgagagtcaggaaccggtggtgtgggacatcctcgaagaggtgatccgcgag
catccggtcatgctgaaccgcgccccgacgcttcaccgtctcggtattcaggccttcgag
cccgtccttatcgaaggcaaggcgatccagctgcatccgctcgtctgcgtcgcgttcaac
gccgacttcgacggtgaccagatggccgtccacgtgccgctgtcgctcgaggcccagatg
gaagcccgcacgctgatgctggcgtcgaacaacgtgctgtcgcctgccaacggcgagccg
atcatcgtgccgtcgcaggacatcgttctcggtctctactacgcaacccgcgaaggcgtg
aatgcgctgggcgagggcatggcgctgtcggacgtcggcgaactcaagcgcgcctacgag
tcgaagcagctgtcgctgcatgcccgcgtgtccgtgcgcctgaaggaaatcgaagtcggt
gccgacggcgaacgtcgcgaaaagatcacccgctacaacaccacggccggtcgcgcgatg
ctgtcggagatcctgccgccggggctgcctttcagcgtgatcgacaagccgctgaagaag
aaggaaatctccaagctcatcaacgcctcgttccgtcgctgcggcctgaaggagacggtt
gtgttcgcggacaagctgatgcagttcggcttccgtctcgccacgcgcgccggtatttcg
atcgcggtcaaggacatgctggtcccgaccctgaaggactcgctgatccacgccgccgaa
caggaagtcaaggagatcgctcggcagtacacgtccggtctcgtgacggatggtgagcgt
tacaacaaggtcgtcgatatctgggggcgcgcgggtgaccaggtcgccaaggcgatgatg
gatcagctcggccaggaagacgtcgtcaaccgcaagggcgagacggtcaagcaggagtcc
ttcaactccatctacatgatggccgactcgggtgcgcgcggttcggctgcgcagatccgt
cagctcgccggcatgcgcggcctgatggcgaagccggacggctccatcattgagacgccg
atcacgacgaacttccgtgaaggcctgaacgttctgcagtacttcatctcgacgcacggt
gcccgtaagggtctggccgataccgcgctgaagaccgcgaactcgggctatctgacccgc
cgtctggtcgacgtcacgcaggatctggtcgtcaccgaagacgattgcggcacgcgcggc
ggcttcgtgatgaaggcgctcatcgagggcggtgaagtcatcgagccgctgcgcgagcgt
atccttggccgcgtttgcgccgaagatgtcgtcaatcccgactcgcaggagaccgtgatc
gaagccggtacgctgctcgacgagagtgccgtcgatctcatcgagagcctcggcatcgac
gaggtgaaggtgcgcaccgcgctcacctgcgaaacgcgttatggcctgtgcggcaagtgt
tatggtcgcgacctgggtcgtggcaacctcgtgaacgtcggcgaggccgtcggtgtgatc
gctgcccagtcgatcggcgagccgggtacccagctcacgatgcgtaccttccacgtcggt
ggtgcggcgtcgcgagccgcagcagccagcggggtcgagtcgaagtcggccggaaccatc
cgctttgccggcaacatgcgttacgtctcgaacgtgaagggcgagaaggtcatcatcgcc
cgttccgcggagatcgttgtcgccgacgacatgggccgcgagcgcgagcgtcacaagctg
ccgtacggtgcgacgttgttggtcgacgacggtgccgcgatcaaggccggcgtcatgctc
gccacctgggatccgcatacccgaccgatcgtcacggaatattcgggcacggtgaaattc
gaaaatgtcgaggaaggcgtcacggtcgcgaagcagatcgacgaagtgacgggcctgtcg
accctggtggtcatcgacggcaagcggcgctcctccggcgcgtcgtcgaagggcgtgcgt
ccgcaggtcaagctgctcgacgagaacggggaggaggtgaagattgccggtaccgatcac
tcggtggcgattaccttccaggtcggctcgctgatcaccgtcaaggacggccaggtcatc
ggcgtcggcgacgtgctggcgcgtattccccaggaatcggcgaagacgcgcgacattacc
ggcggtctgccgcgtgtggcggaactcttcgaagcccgcccgccgaaggatgccggcgtg
ctcgccgaatataccggcaccgtgtcgttcggcaaggacacgaagggcaagcagcgcctg
gtgatcaccgaagccgatggtaccgcgcacgagttcctgatcccgaaggacaagcacgtg
atggtgcacgacggccaggtcgtcaataagggcgaactgatcgtcgatggtccggcggac
ccgcacgacatcctgcgtctgcaggggatcgaggcgctggcgcgttacatcatcgatgaa
gtccaggacgtgtatcgtctgcagggcgttaagatcaacgacaagcacatcgaggtcatc
gtccgtcagatgctgcgtcgcgtggtcattaccgatgccggcgacaccaagttcatccgc
gaggaacaggtcgagcgttcggaagtgctcgacgaaaacgaccgtgcggaagccgacagc
aaactcccggcgcagtaccagaacgtcctgctgggtatcacgaaggcttcgctgtcgacc
gattcgttcatctccgccgcgtccttccaggaaacgacgcgcgtgctgaccgaagcggcc
atcatgggcaagcgtgacgaactgcgcgggctcaaggaaaacgtcatcgtcggccggctc
attcccgccggtaccggtatggcgtaccaccgcaaccgccgggcgcagtcggcgggcgag
gatctcgcagccgagcatgcatgggcggctatgcaggaacagccgtcggaagtgcccgac
ggtgtctcgcaagatgtgcaggccggttga
DBGET
integrated database retrieval system
