Aromatoleum petrolei: ToN1_20620
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Entry
ToN1_20620 CDS
T07150
Symbol
rhlE2
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ToN1_20620 (rhlE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apet03019
]
ToN1_20620 (rhlE2)
Enzymes [BR:
apet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ToN1_20620 (rhlE2)
Messenger RNA biogenesis [BR:
apet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ToN1_20620 (rhlE2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
P-loop_SecA
UvrD-helicase
HI1480
CMS1
DUF3025
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTQ36211
LinkDB
All DBs
Position
2198509..2200158
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AA seq
549 aa
AA seq
DB search
MTNRSQALRYTPVATISGRTTPPASIGVALTQRQAVAGASFLITSEVSFASLGLAEPLLR
AISESGYTQPTPIQAQAIPLVLAGGDLLAAAQTGTGKTAGFTLPLLHRLSTTSASAPKAG
RPRCLILTPTRELAAQVEESVQTYGKHLPLTSMVMFGGVNINPQITALKKRVDILVATPG
RLLDHAGQKTVDLSGVEILVLDEADRMLDMGFIRDIRKVLALLPKQRQNLLFSATFSDEI
RSLANGLLNNPGCVEVARRNTTTELVEQSVYSVPQKQKRDLLVHLVKEHDWHQVLVFTRT
KHGANRLAEYLGKHGIPAAAIHGNKSQAARTRALSQFKDNSLPVLVATDIAARGLDIDQL
PQVVNFELPNVPEDYVHRIGRTGRAGATGKAISFVDSEERPYLASIERLIKRSIERATVP
EFVTHAPDPGDNDRPPRDPRQASGRRNDGRAPRQPQTERPAPRAQAHGANRQPARQGAQG
PAGNGGKPANRPAHNGETNRNGAPRGQDAGATRAPRTGDAPRAAARPDSGRSPAPRAALF
SAKPGNRRD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaatcggtcacaggccctccgatacacccccgttgcgaccatttccggtcgcaca
accccgcccgcctcgattggtgtcgctctaacgcagcgacaggccgtcgctggagcatcc
ttcttgatcacttccgaagtttccttcgccagtctcggactggccgaaccccttttgcgc
gccatttccgaatcgggctacacgcaaccgacgccgatccaggcgcaggccattccgctg
gtgctggccggtggcgacctgcttgccgcagcccagaccggcaccggcaagaccgcgggc
ttcacgctgccgctgctgcaccggctgtccaccacctccgccagcgcccccaaggccggt
cgtccgcgctgcctgatcctgaccccgacgcgcgaactcgcggcacaggtcgaggaatcc
gtgcagacctacggcaagcacctgccgctgacctcgatggtcatgttcggcggcgtgaac
atcaatccgcagatcacggcactgaagaagcgcgtcgacatcctcgtcgcgacccccggg
cgtctgctggaccatgccgggcagaagacggtggacctgtccggggtcgagatcctcgtc
ctcgacgaggccgaccgcatgctggacatgggcttcatccgcgacatccgcaaggtgctc
gcgctgctgccgaagcagcgccagaacctgctgttctcggcgaccttctcggacgagatc
cgctcgctcgccaacggcctgctgaacaaccccggctgcgtcgaggtcgctcgccgcaac
accaccaccgaactggtcgaacagtccgtgtattcggtgccgcagaagcagaaacgcgac
ctgctcgtgcatctggtgaaggaacacgactggcatcaggtgctggtgttcacgcgcacc
aagcacggcgccaaccggctggccgaatacctcggcaagcacggcattccggccgcggcg
atccacggcaacaagagccaggcggcgcgcacgcgcgcgctgtcgcagttcaaggacaac
tcattgccggttctggtggcgacggacatcgcggcgcgcggcctggacatcgaccagttg
ccgcaggtggtgaacttcgagctgccgaacgtgccggaagactacgtgcaccgcatcggc
cgcacgggccgcgccggggcgacgggcaaggcgatctccttcgtcgacagtgaggagcgg
ccttatctggcgtcgatcgagcgcctgatcaagcgcagcatcgagcgcgccacggtgccg
gaattcgtgacccacgcgcccgatccgggcgacaacgaccgcccgccgcgcgatccgcgc
caggcgtcgggacggcgcaatgacggccgcgctccgcgccagccgcagaccgaacgtccc
gcgccgcgggcgcaggcacatggggcgaaccgccagccggcacgccaaggcgcgcaaggc
cccgcgggcaacggcggcaagccggcgaatcgcccggcgcacaacggcgagacgaaccgg
aacggtgcgccgcgcggtcaggacgcaggcgccactcgcgcgccgcgcacgggcgatgcg
ccgcgcgcagcggcacgtccggattcggggcgcagcccggcgccgcgcgctgcgctcttc
agcgccaagccgggcaatcggcgcgactga
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