Aromatoleum petrolei: ToN1_27310
Help
Entry
ToN1_27310 CDS
T07150
Symbol
recB
Name
(GenBank) RecBCD enzyme, subunit B
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ToN1_27310 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apet03400
]
ToN1_27310 (recB)
Enzymes [BR:
apet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ToN1_27310 (recB)
DNA repair and recombination proteins [BR:
apet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ToN1_27310 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_11
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QTQ36867
LinkDB
All DBs
Position
2928174..2931914
Genome browser
AA seq
1246 aa
AA seq
DB search
MSEPQQLDPLAFPLHGSRLIEASAGTGKTFTIAALYVRLVLGHGGEAAFARALTPPEILV
VTFTDAATQELRDRIRARLAEAAGYFRAEAEAVDTLERGKNFLHDLRADYPPEVWPGCAR
KLQLAAEWMDEAAVSTIHGWCKRMLNEHAFDSDSLFTQQLEADQSELLAEVVRDFWRSFF
VPLDADAVAEIAGWWATPDALQGELGKLVEHAEALDEAPEPAEAVAAARDDKAKALAALK
APWVDWADELQELLNAAVAAKKVNGQKLKKGNYDRWFDGLRAWIDDPTLIMPELKTGWTR
FTRAGLAEVWKEGDPPDHPALDAMLTLKAELESLPDARADLLRFAARWVARRFAAEQQRR
AQMGFNDLLTRLAAALGLPNGARLAEVIRRQFPVALIDEFQDTDPVQYDIFDRVYRIADN
APDSGVVLIGDPKQAIYAFRGADIFTYLRARRDAGGRLFTLGTNFRSTEAMVAAVNRCFA
LAETRAQGEGAFLFRAEDDNPVPFHAVAANGRRERLVVEGEAVSALTCWTLEPREAGKAV
GVTDYRARMAASCAAEVVRLLNLGQHGRAGFAREGEGFAPLRPADIAILVNSRKEANAVR
AKLAAGGVRSVYLSDQESVFASPQAEELQRWLAACAEPDDDGLLRAALATPSLGLDWAAL
DRLRRDELEWEARVLQFRAYRQLWRRQGVLPMLRRLLGDFGVPRRLLGGGERAEQDGERA
LTDLLHLAELLQHASVALDGEHALIRHLAEQRADAANGDDARKLRLESDADLVQVVTVHK
SKGLEYPLVFLPFACAYRPVDPADLPIKLHDDAGRLRLALEPADGEVAQADRERLGEDLR
KLYVALTRARHATWIGVAPLDGLERSALGYLLAGGASVAVDALPVALDVLRGECGHIAVA
PAPAPAGDRFTPRIARSELGAAREPRRPVREFWWIASYSALRTAEAEGGAREPGSASADA
AAVPAFVPPLPAAETPAEETFAEVLDESPGAPAAPGADQRLHRFARGAGPGTFLHELLEW
AAREGFGRVRAAPERARDMIARRCAVRGWSHWTETLTRWLLDFIATPLPLPDGEAPCLAE
LAGARPEMEFWFETHRADLGRLDALVRAHTLAGAPRPALAPGQLNGMLKGFIDLVFEHQG
RYYVADYKSNWLGADDAAYTLDAMRDAVLAKRYELQYVLYLFALHRLLKVRLPDYDYDRH
VGGAVYLFLRGSHAPTRGVHAERPPRALIEALDAAFGRILAGEGGQ
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgcagcaactcgacccgctcgccttcccgctgcacggcagccgcctcatc
gaggccagcgccggcaccggcaagaccttcacgatcgccgcgctgtacgtgcgcctcgtg
ctcggccacggcggcgaggcggccttcgcgcgcgcgctgacgccgcccgagatcctcgtc
gtgaccttcaccgacgccgcgacgcaggaactgcgcgaccgcatccgcgcgcgcctggcc
gaggccgcgggctacttccgcgccgaagcggaggcggtcgacacgctggagcgcggcaag
aatttcctgcacgacctgcgcgccgactacccgcccgaggtctggcccggctgcgcgcgc
aagctgcagctcgccgccgagtggatggacgaggccgcggtgtcgaccatccacggctgg
tgcaagcgcatgctcaacgagcacgccttcgacagcgacagcctgttcacgcagcagctc
gaagccgaccagagcgaactgctcgccgaggtcgtgcgcgacttctggcgcagcttcttc
gtccccctcgacgcggacgccgtcgccgagatcgccggctggtgggcgacgccggacgcg
ctgcagggcgaactcggcaagttggtcgagcatgccgaggcgctcgatgaggcgccggaa
ccggctgaggcggttgccgccgcacgcgacgataaggcgaaggcgctcgcggcactcaag
gcgccatgggtggattgggctgatgaactgcaagaactactgaacgccgccgttgcggcg
aagaaggtgaacggccagaagctgaagaagggaaattacgaccgctggttcgacggcttg
cgtgcctggatcgatgatccgacgctgatcatgccggaactcaagaccggctggacgcgc
tttacgcgcgccggcctggccgaggtttggaaggaaggcgatcctcccgatcaccccgcg
ctcgacgcgatgctgacgctcaaggccgaactggaaagcctgccggacgcgcgcgccgac
ctgctgcgctttgccgcgcgctgggtcgcccggcgttttgcggccgagcagcagcgccgg
gcgcagatgggcttcaacgatctgctcacgcgcctggccgcggcgctgggcctgccaaac
ggcgcgcgcctcgccgaggtgatccgccgccagtttccggtcgcgctgatcgacgaattc
caggacaccgacccggtccagtacgacatcttcgaccgcgtctatcgcatcgccgacaac
gcgccggattccggcgtcgtgctgatcggcgaccccaagcaggcgatctacgccttccgc
ggcgcggacatcttcacctacctgcgcgcgcgtcgcgacgcgggcgggcggctattcacg
ctcgggacgaacttccgttcgaccgaggcgatggtcgcggccgtgaaccgctgcttcgcg
ctggccgagacgcgcgcgcagggggagggggccttcctctttcgcgccgaggatgacaac
cccgtgcctttccacgcggtcgcagccaacgggcgacgcgaacgcctcgtcgtcgagggc
gaggcggtctcggcactcacctgttggaccttggaaccgcgcgaggcaggcaaggcggtt
ggcgtcaccgattaccgcgcccgcatggcggcgagctgcgccgccgaggtcgtgcgcctg
ctgaacctcggccagcacgggcgcgcgggttttgcgcgcgagggggaaggattcgcgccc
ttgcgcccggccgacatcgcgatcctcgtgaacagccgcaaggaggccaacgccgtgcgc
gccaagcttgccgcgggcggggtgcgcagcgtctatctgtccgaccaggaatccgtgttc
gccagcccgcaggccgaggagctgcaacgctggctcgccgcctgtgccgaaccggacgac
gacggcctgctgcgcgccgcgctcgcaacgcccagcctcggactcgactgggcagcgctc
gaccgcctgcgccgcgacgagctcgaatgggaagcgcgcgtgctgcagttccgcgcctac
cgccagctgtggcgtcggcagggcgtgctgccgatgctgcgtcgcctgctgggtgacttc
ggcgtgccgcggcgacttctcggtggaggggagagggcggagcaggacggcgagcgtgcg
ctcacggatctcctgcatctggccgaactgctgcagcacgcgagcgtcgcgctcgacggc
gagcatgcgctgatccgtcacctcgcggagcagcgcgccgacgctgcgaacggcgatgat
gcgaggaaactgcgcctcgagagcgatgccgacctcgtgcaggtcgtcaccgtgcacaag
tccaagggcctcgaatacccgctcgtgttcctgcccttcgcctgcgcctatcgtccggtc
gatcctgccgatctgccgatcaagctgcacgacgacgcggggcgcttgcggctcgcgctg
gaacctgcggacggcgaggtcgcacaggccgaccgcgaacgcctcggcgaggatctgcgc
aagctctacgtcgcgctaacgcgcgcgcgccacgcgacctggatcggcgtcgcgccgctc
gacgggctggaacgcagcgcgctgggctacctccttgcgggtggcgcctcggtcgcggtg
gacgccttgcccgttgcgctggacgtcctgcgcggcgaatgcggccacatcgccgtcgca
cccgccccggcgcccgcgggcgatcgcttcacgccgcgcatcgcccgcagcgagctcggc
gccgcgcgcgagccgcgccggccggtgcgtgaattctggtggatcgcgagctattcggcg
ctgcgcaccgcggaggcggaaggcggcgcgcgcgagcctggctcagccagtgcggacgcc
gccgccgtacccgcgtttgttccaccactgcctgccgccgaaacccccgccgaggagacc
ttcgccgaggtcctcgacgaaagtccgggtgctcccgctgcccccggcgcggaccagcgc
ctgcaccgtttcgcgcgcggtgcgggtcctggcaccttcctgcacgagctcctcgaatgg
gccgcgcgcgaaggcttcggccgtgtgcgtgcggcgcccgagcgcgcccgcgacatgatc
gcgcgccgctgcgccgtacgcggctggagccactggaccgagacgctcacgcgttggctg
ctcgacttcatcgcaaccccgctgcccttgcccgacggcgaggcgccgtgccttgccgag
ctcgccggcgcccgccccgaaatggagttctggttcgagacccaccgcgccgacctcggc
cgcctcgatgccctcgtgcgcgcccacaccctcgccggcgcgccgcgtccggcgctcgcg
ccgggccagctcaatggcatgctcaagggcttcatcgatctggtcttcgaacaccagggg
cgctattacgtggccgactacaaatccaactggctgggggccgacgacgcggcctacacg
cttgacgcgatgcgcgacgcagtcctcgcgaagcgctacgagctgcaatacgtgctctac
ctcttcgcgctgcaccgcctgctcaaggtgcgcctgccggactacgactacgaccgccat
gttggcggcgcggtgtacctcttcctgcgcggcagtcacgcgccgacccgcggcgtgcat
gccgagcgtccgccgcgcgcgctgatcgaggcgctggatgcagcgttcggacggatcctg
gccggggagggcgggcaatga
DBGET
integrated database retrieval system
