Aromatoleum petrolei: ToN1_27320
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Entry
ToN1_27320 CDS
T07150
Symbol
recD
Name
(GenBank) RecBCD enzyme, subunit D
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ToN1_27320 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apet03400
]
ToN1_27320 (recD)
Enzymes [BR:
apet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ToN1_27320 (recD)
DNA repair and recombination proteins [BR:
apet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ToN1_27320 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
Phageshock_PspD
AAA_16
NTPase_1
SLFN-g3_helicase
AAA_28
UvrD_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QTQ36868
LinkDB
All DBs
Position
2931911..2934052
Genome browser
AA seq
713 aa
AA seq
DB search
MTRSTRGTRPGADRMDDLFAGMDDRGVAVRSDIPALLRRWAERGWLRPLDRVLADFLHDA
APDAAPLLLLAAALASHQLGRGHVCLDLAATLADPRFALSLPPEGDDDTGLPPLPDEVLA
GVTLADWIAALAHPLLVAQGVGNTPLALVDTRLYLRRYWQYECDVRAGIDARLAAPPPEP
DPGAFRQALDALFPPRAEGAVDWQKLACALVARSAFGIVTGGPGTGKTTTVVRLLALLQS
LALTGPQGRPLRIRLAAPTGKAAARLNESIAGAVAQLELDRLPGGEAVRATIPVAVGTLH
RLLGSRPDTRHFRHDVRNPLALDVLVVDEASMVDLEMMAAVLAALPAHARLVLLGDKDQL
ASVEAGAVLGELCARASKAHYTPATRDWLAGVTGTRVDDALVDAQGEPLDQAVAMLRVSH
RFTADSGIGRLAEAVNAADRAAMHAVLNGSGAQPCVDLARLRLAGDADLRGLVIDGGAEN
FPGGGKLAGKDVPSPAGFGHYLQGMRDGRPPLDATQTDFDRWARAVLAAHGHFQLLCALR
RGPWGVAGLNERVARMLHAVGLIAADHGWYPGRPVLVTRNDYGLGLMNGDVGVTLELPRP
APDGGLQWGLRVAFPAGDGSDGVRWVLPSRLQAVETVYAMTVHKSQGSEFTHAALVLPDT
LNPVLTRELVYTGITRARQWLTLATAGSDRVLDEAVDRRVLRASGLMAARHVS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcagcacccgaggcacccgtcccggcgcggaccgcatggatgacctgttcgcg
ggcatggacgatcgcggcgttgccgttcgcagcgacattcccgcgctgctgcgccgctgg
gcggagcgtggctggctccgcccgctcgaccgggtgctcgccgacttcctgcacgacgcg
gcgcccgatgccgcccccctgctgctcctcgccgcggcgctcgcgagccaccagctcggg
cgcggccatgtgtgtctggatctcgccgcgacgctcgccgatccgcgcttcgcgctgtcg
ctgccgcccgagggggacgacgacacgggcttgccgccgctgcccgacgaggtgctcgcg
ggcgtgacgctggcggactggattgcggcgctggcgcatccgctgctcgttgcgcagggc
gtcggcaacaccccgctcgcgctcgtcgacacccgcctctacctgcgccgctactggcaa
tacgaatgcgacgtgcgtgccgggatcgacgcgcgcctggcggcgccgccgccggagccc
gaccccggcgccttccgccaggcgctcgacgcgctgttcccgccgcgcgcggagggtgcc
gtggattggcaaaagctcgcctgtgcgctggtcgcgcgcagcgccttcggcatcgtcacc
ggcggccccggcaccggcaagaccaccaccgtcgtgcgcctgcttgcgctgctgcagagc
ctcgcgctcaccgggccgcagggccgcccgctgcgcatccgcctcgccgcgcccaccggc
aaggcggcggcgcggctcaacgagtcgatcgcaggtgcggtcgcgcagcttgagctcgat
cgcctgcccggcggcgaagccgtgcgcgcgacgatcccggtcgccgtcggcacgctgcat
cgtctcctcggcagccgccccgacacgcgccacttccgccacgatgtgcgcaacccgctg
gcgctcgacgtgttggtcgtcgacgaggcctcgatggtcgacctcgagatgatggccgcg
gtgctcgccgcgctccccgcccatgcccgtctcgtgctgctcggcgacaaggatcagctc
gcctcggtcgaggccggcgcggtgctgggcgagctgtgcgcccgcgccagcaaggcccat
tacacgccggcgacgcgcgactggctcgccggcgtgaccggcacgcgcgtcgacgacgcc
ctcgtcgacgcgcagggcgagccgctcgaccaagccgtggcgatgctgcgcgtgagtcac
cgcttcaccgccgacagcggcatcggccgcctcgccgaggccgtgaatgccgccgaccgg
gcggcgatgcacgcggtgttgaacggatcgggggcgcagccttgcgtcgatctcgcgcgc
ttgcggctcgccggcgacgcggacctgcgcggccttgtgatcgacggcggcgcggagaat
ttccccggcggcgggaagcttgccggcaaggatgtaccgtcgcccgcgggtttcggccat
tacctgcaggggatgcgcgacggacgtccgccgctcgacgccacgcagaccgacttcgac
cgctgggcgcgcgcggtgctcgccgcgcacgggcatttccagctgctgtgcgcgctgcgc
cgcgggccgtggggcgtcgcagggctcaacgaacgcgtcgcgcgcatgctgcacgcggtg
ggcctgatcgcggccgatcacggctggtaccccggccggcccgtgctcgtcacgcgcaac
gactacggcctgggcctaatgaacggggacgtcggcgtcacgctggaactgccgcgtccg
gcgccggacggcggactgcagtggggcctgcgcgtggccttccccgcgggcgacggcagc
gacggcgtgcgctgggtgctgccgagccgcctgcaggcggtcgagacggtgtacgcgatg
acggtgcacaagtcgcagggctcggaattcacgcacgccgcgctggtgctgcccgacacg
ctgaaccccgtcctcacgcgcgagctggtgtatacgggcatcacccgcgcgcgccagtgg
ctgacgctggcaacggcgggttccgaccgggtgctggacgaggccgtcgaccggcgcgtg
ctgcgcgcgagcggcctgatggccgcccgccacgtctcgtaa
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