Aromatoleum petrolei: ToN1_44350
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Entry
ToN1_44350 CDS
T07150
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apet
Aromatoleum petrolei
Pathway
apet03030
DNA replication
apet03430
Mismatch repair
apet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ToN1_44350
03430 Mismatch repair
ToN1_44350
03440 Homologous recombination
ToN1_44350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apet03032
]
ToN1_44350
03400 DNA repair and recombination proteins [BR:
apet03400
]
ToN1_44350
Enzymes [BR:
apet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ToN1_44350
DNA replication proteins [BR:
apet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ToN1_44350
DNA repair and recombination proteins [BR:
apet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ToN1_44350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QTQ38533
LinkDB
All DBs
Position
4719691..4721859
Genome browser
AA seq
722 aa
AA seq
DB search
MTARARFILAVCILALLMTGPFVLTAGLVWLEAGEADRARLIDAVAPHLPLGTLMTIAGF
AIGMAVVRNLFRQYVKGLLRMEEHLKLMLGANHEFRVKPAGPPEVQALAHAVNALAQQRD
ELLQDVEAQISQAKHSVEEEKNRLAALMSELTQSVVVCNLDGRILLYNHRARQQFRALSD
APAVAGGGELIGLGRSIYAVFERNLVNHALESIQHRLRRSATQPVANFVTTTRAGQLLRA
QMAPVLSVTQGEGGERAITGFILMLDNITRTFETESKRDQMLHTLTEGNRAALANVRAAA
EMLEYPDLQEDLRERFRTVIRDEVRAMSTRLDETANEFADSLKARWPLEEMLGADLIAAV
QRRIENVVRLPTKLEEVDESLWVKVDSFSLLQALTYLANRLSDEFEVREVRFRLSAAGRL
AHLDLIWSGQAMSTETVMSWELEPMRFADENSPLTVRDVIERHDGEMWLEREKVRHRAFF
RILLPAAVPQEQLDEATILKGESRPEYYDFDLFNWSDKSRALDDRLLSELTYTVFDTETT
GLNPSQGDEIIQIGATRIVNCKLLRQESFEQLVDPCRYLSPESVQIHGITQEMLKNQPTI
EAVLPAFHAFAEDTVLIAHNAAFDMRFLQLKEEATGIRFDQPVLDTLLLSAVIHPNQESH
RLEAIAERLNLPILGRHTALGDAIVTAEVFLKMIPLLATMGIRTLRQAREAAEKSYYARV
KY
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcgcgcgcgtttcatcctcgcggtgtgcatcctcgcgttgctgatgacgggt
cccttcgtgctgaccgccgggctggtgtggctggaagcgggcgaggcggaccgcgcgcgc
ctcatcgacgcggtcgcgccgcacctgcccttgggtaccttgatgaccattgccggtttt
gcgatcggcatggcggtcgtgcgcaacctgttccggcaatatgttaaggggctcctgcgg
atggaggagcacctcaagttgatgctcggcgccaatcacgagtttcgcgtcaagcccgcg
gggccgcccgaagtgcaggcgctcgcacacgccgtgaacgcgctggcccagcaacgcgac
gaactgctgcaggacgtagaggcgcagatctcgcaggcaaagcactccgtcgaggaggag
aagaaccgcctcgcggcccttatgtcggaactcacgcagagcgtcgtcgtgtgcaacctc
gacggccgcatcctgctgtataaccaccgtgcacggcagcagttccgcgccttgtcggat
gcacctgcagtcgctggaggcggcgagttgatcgggctcggacgctcgatctacgccgtc
ttcgagcgcaatctcgtcaatcacgcattggaaagcatccagcaccggctgcggcgcagc
gcgacccagccagtggccaacttcgtcacgaccactcgtgccggccaactgctgcgggcg
cagatggcgccggtgctttccgtgacacagggggagggtggcgagcgggccatcaccggt
ttcatcctcatgctcgacaacatcacacgcaccttcgagacggaatcgaagcgcgaccag
atgctgcataccctcaccgaaggcaaccgtgccgcgctcgccaacgtgcgcgccgcggcc
gagatgcttgaataccctgatctgcaggaagatctgcgcgagcgtttccgcaccgtgatc
cgcgatgaggtgcgggctatgagcacccgtctggacgagaccgccaacgaattcgccgat
tcgctcaaggcgcgctggccgctggaggagatgctcggtgccgacctgatcgccgccgtg
cagcggcgcatcgagaatgtcgtcagattgccgacgaaactggaggaggtcgacgaatcg
ctgtgggtcaaggtcgacagcttctcgctgctgcaggccctgacctatctggcgaaccgc
ctctcggatgaattcgaggtgcgcgaggtgcgcttccggttgagcgcagcgggccgtctg
gcgcacctcgatctcatctggtccggccaagcgatgagtaccgagacggtgatgagttgg
gaactggaaccgatgcgtttcgccgacgagaacagcccgctgacggtgcgcgacgtgatc
gagcgccacgacggcgagatgtggctggagcgcgaaaaggtgcgtcaccgcgcgtttttc
cgcatcctgctgccggccgcagtgccgcaggagcagctcgacgaggcgacgatcctgaag
ggcgaaagccggcccgaatactacgacttcgacctcttcaactggtccgacaagtcgcgt
gcactggatgaccgcctgctcagcgagctgacttacaccgttttcgacactgagacgacc
gggctgaacccctcgcagggcgacgagatcattcagatcggcgcgacccgcatcgtcaat
tgcaagttgctgcgtcaggagtcgttcgagcagctcgtggatccgtgtcgttacctgtcg
ccagagtcggtgcagatccacggaatcacgcaggaaatgctcaagaaccagcccacgatc
gaggcggtcctgccggcattccatgcgtttgccgaggacacggtgctgatcgcgcacaac
gccgcattcgacatgcgcttcctgcagctgaaggaggaggcgaccggtatccgcttcgac
cagcccgtgctcgatacgctgctgctgtccgccgtcattcatccgaaccaggaatcgcac
cgcctggaggcaatcgccgagcggctcaatctgcccatcctcggacgccatacggctttg
ggcgatgcgatcgtcactgccgaggtcttcctgaagatgattccgctgctcgcgaccatg
ggcatccgcaccttgcgccaggcgcgtgaggccgcggagaagtcgtactacgcgagggtc
aagtattga
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