| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
apf Acetobacter pasteurianus IFO 3283-03
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:apf00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APA03_09280 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:apf03021]
APA03_09280 (rpoC)
03400 DNA repair and recombination proteins [BR:apf03400]
APA03_09280 (rpoC)
Enzymes [BR:apf01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APA03_09280 (rpoC)
Transcription machinery [BR:apf03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APA03_09280 (rpoC)
DNA repair and recombination proteins [BR:apf03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APA03_09280 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
969117..973292
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| AA seq |
1391 aa
MNELMKILGQTGQAMTFDQIKIQLASPEQIRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIICEKCGVEVTLAKVRRERMGHIQLASPVAHIWFLKSL
PSRIGLMVDMTLKDLEKVLYFESYLVLEPGTSPLKQYSLLTEEQYLDAMDEYGDEGVEVG
IGAEAIKKVLERIDCDAEKVELRQELKETTSEAKRKKLVKRLKLIEAFAESGSRPEWMIL
DLVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRAITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
ELKLHQCGLPKKMALELFKPFIYAKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLETPEFKVTPDRCEYDETTGALTKE
GAPSFSSIGEVEYALSAGALKLHDKIRARFQKIGADGKVTYETAVTTPGRVLIAQILPQH
EAVPFSLINRQLTKKAVSDVIDTVYRHCGQKEAVIFCDRLMALGFRHAAKAGISFGKDDM
IIPPEKKELVDRTAAEVKEFEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMTKEISRQ
EVGKQINSVWMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIEQPIIANFKEGLSVLDYF
TSTHGARKGLADTALKTANSGYLTRRLVDVAQDSIIIEEDCGSERGLTVRAVMDGGEVVA
SLSERILGRTVASDVVVPGTGEVIVPRNHLIDEADAERIEKSGVETVHIRSVLTCDSRVG
VCGRCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQRGAEQSMIEAS
RDGHVVIRNRNVVHNSQNVPIVMARNCEILLSDDNGVEKARYRVPYGARLLTEEGAKVAR
GQKLAEWDPYTLPIITEKAGKVEYLDLIDSITLVERMDEVTGLTSKVVVDYKQAGKGVDL
RPRLQLKDANGDVVKLDNGADARYFLSPETLLSVENGTEVNAGDVLARLPREGSKTRDIT
GGLPRVAELFEARRPKDHAIIAEMEGRVEFGKDYKSKRRVIVKNDETGEEQEYLIPKGKH
ISVQEGDFVEKGDPLVDGPRVPHDILKVMGVEALSDYLINEIQDVYRLQGVKINDKHIEV
IVRQMLQKVEILEPGDTTYLIGETVDRIEFEAENAKCLKAGERPAQGMPVLQGITKASLQ
TQSFISAASFQETTRVLTEAATAGKVDKLMGLKENVIVGRLIPAGTGSVMKRLRAIAAEQ
DRQRVGRSAAE |
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| NT seq |
4176 nt +upstreamnt +downstreamnt
atgaatgagctcatgaaaattcttggccagaccggccaggcgatgacgtttgatcagatc
aagattcagctggcatcgcccgaacaaatccgttcctggtcttatggcgaaatcaagaag
cccgagaccatcaactatcgtacgttcaagccagaacgggatggcctgttctgcgcgcgt
atttttggtccgatcaaggattatgaatgcctttgcggtaaatacaagcggatgaaattc
cgcggtattatctgcgaaaagtgcggtgttgaagttacgctggccaaagtgcgtcgtgaa
cgcatgggccatattcagcttgccagccccgttgcccatatctggttcctgaagtctctg
cctagccgtatcggcctgatggttgatatgacgctgaaagatctggaaaaggtgctttac
tttgaaagctacctggttctggaacccggcacgtctccgctgaagcagtactccttgctg
acggaagaacagtaccttgatgccatggacgaatatggcgatgagggtgttgaagtcggt
attggtgcagaagccattaaaaaggttctggagcgcattgactgcgatgccgaaaaggta
gagctgcgccaggaacttaaggaaacaacttcagaagctaagcgcaaaaagctcgttaag
cgcctgaagctgattgaagcgtttgcagaaagcggttcccgcccagaatggatgattctg
gatctggttccggttattccgcctgatctgcgtccgttggtgccgctggatggtgggcgt
tttgcaacgtctgatctgaacgatctgtatcgtcgcgtcatcaaccgtaataaccgtctg
aagcgcctgatggagctgcgtgcgcccgatattatcgtgcgtaacgaaaagcgtatgctt
caggaagctgtggatgcgctgttcgataacgggcgtcgtggccgggctatcacgggtgct
aacaagcgtccgctgaaatccctgtccgatatgcttaaaggtaagcagggtcgtttccgt
cagaacctgctgggtaagcgcgtcgattactctggccgttccgttattgtggtgggccca
gaacttaagctgcaccagtgcggtcttcccaagaagatggctctggaactgttcaagccg
ttcatttacgccaagctggaaaaatacggtcacgccaccaccattaaggctgcaaagcgg
atggtggaaaaagagcgcccggaagtttgggatattcttgaagaagttatccgcgaacat
ccggttatgcttaaccgtgcgcctacgctgcaccgtttgggcattcaggcgtttgaaccg
gtgctggttgaagggaaggctattcagctgcacccgctcgtctgcaccgcgtttaacgca
gactttgacggtgaccagatggctgtgcacgtgccgctgagccttgaggcccagcttgag
gcacgtgtgctgatgatgtccaccaacaacattctcagcccggcaaacggtaagccgatt
attgtgccttctcaggatatcgttctagggctgtattacctcagcctcgaaacacctgaa
ttcaaggtcacgccggatcgttgtgagtatgacgaaacaacaggtgctctgaccaaagaa
ggtgcgccgtctttctcttccatcggtgaagtggaatatgcgctgagcgctggcgcactg
aagctgcatgataaaattcgtgcacgcttccagaagatcggtgcagatggcaaggtcacc
tacgaaacagccgtgaccacgcccggtcgtgtgctgattgcgcagatcctgccgcagcat
gaagctgtgccgttctccctcatcaaccgtcagctcaccaaaaaggctgtgtctgacgtt
attgatacggtgtaccgtcactgtggtcagaaagaagccgttatcttctgtgaccgtctg
atggctttgggtttccgtcacgctgctaaggctggtatttccttcggtaaggatgacatg
atcatcccgcccgaaaagaaagaactggttgatcgcacggctgccgaagtgaaagagttt
gaacagcagtatcaggatggtctgatcacggctggcgaacgctacaacaaggtggtcgat
gcatggtcacgttgcacggacgaagtgcaggcggccatgaccaaagagatttcccgtcag
gaagttggcaagcagatcaactccgtgtggatgatgagccactccggggctcgtgggtcg
ccggctcagatgaagcagctcgccggtatgcgtggtctgatggccaagccatctggtgaa
attattgaacagccgattattgccaactttaaagaaggcctgtcggttctcgattacttc
acctctacccatggtgcacgtaaaggtctggccgataccgcgcttaaaaccgctaactcc
gggtatcttacccgtcgtctggtggacgtggcgcaggacagcatcattattgaagaagat
tgtggtagtgagcgcggtctgacggtgcgtgcagttatggacggtggggaagttgtggct
tctctgtccgaacgtatccttgggcgtactgttgcttctgatgtggtggttccgggcacc
ggtgaagttatcgtgccgcgcaatcatctgattgatgaagctgatgcagagcggattgaa
aaatccggcgtggaaacggttcatatccgttctgtgctgacctgtgatagccgcgttggt
gtctgcggtcgctgctatgggcgtgatcttgcacgcggcacgccggtaaacatcggtgaa
gctgtgggtgttattgctgctcagtccattggtgagcccggcacacagctgacaatgcgt
accttccatattggtggtgcggcgcagcgtggtgcggaacagtccatgatcgaggcctct
cgtgatggacatgttgtgatccgtaaccgcaacgttgtgcataacagtcagaacgtgccg
atcgtgatggcacgtaactgtgaaatccttctgtctgacgacaacggggtcgaaaaagcc
cgttaccgtgtgccgtatggtgcacgcctgctgacagaagagggtgcaaaggttgctcgc
ggtcagaagctggctgagtgggatccgtacacccttccgatcatcacggaaaaagccggt
aaggttgaatacctggatctgattgactccattacgcttgttgagcgtatggacgaagtg
acaggcctgacatccaaagtggtggttgactataagcaggcaggtaagggggtggatctg
cgcccacgtctgcagcttaaagatgccaatggcgatgtggtgaagctagataacggtgca
gatgcccgttacttcctctctcccgaaacgcttctgtctgttgaaaacggcacggaagtg
aacgccggtgacgttctggcccgtctgccacgtgaagggtccaaaacccgtgatattacg
ggtggtctgccgcgcgttgctgaactgtttgaagcacgtcggcctaaggatcacgctatt
atcgcggaaatggaaggtcgcgttgaattcgggaaggactacaagtccaagcgccgtgtt
atcgtgaagaacgatgaaacgggtgaggaacaggaatacctgatcccgaaaggcaagcac
atttccgttcaggaaggtgactttgtggaaaaaggtgatccgctggtcgatggtccacgg
gtgccccacgatatcctgaaggtgatgggtgttgaggctctgtctgattacctgatcaac
gaaattcaggatgtgtatcgtcttcagggtgtgaagattaacgataagcatattgaagtg
atcgtgcgtcagatgcttcagaaggtcgaaattctggagccgggtgacacgacgtacctg
attggtgaaaccgtggaccgtattgagttcgaggctgaaaatgccaagtgcctcaaggcg
ggtgaacggccagctcagggtatgccggtgctgcagggtatcaccaaggcctctctgcag
acacagtccttcatctctgctgcatcgttccaggaaaccacacgcgtgctcacagaagct
gctacggcagggaaagtggataagctgatgggcctgaaggaaaacgtgattgttggacgt
ctgattccggcaggcacaggcagtgttatgaagcgtctgcgggccattgcggcagagcag
gatcgtcagcgtgttgggcgttctgcggccgaataa |
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