Acetobacter pasteurianus IFO 3283-03: APA03_12590
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Entry
APA03_12590 CDS
T01812
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
apf
Acetobacter pasteurianus IFO 3283-03
Pathway
apf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APA03_12590 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apf03019
]
APA03_12590 (recQ)
03400 DNA repair and recombination proteins [BR:
apf03400
]
APA03_12590 (recQ)
Enzymes [BR:
apf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA03_12590 (recQ)
Messenger RNA biogenesis [BR:
apf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
APA03_12590 (recQ)
DNA repair and recombination proteins [BR:
apf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
APA03_12590 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAI02458
LinkDB
All DBs
Position
complement(1319820..1321700)
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AA seq
626 aa
AA seq
DB search
MIETGSISTPSQFSHSRLERDRFAGKPPQEVLQAVFGFPGFRSLQAQAVECVMEGRDTLV
LMPTGGGKSVCYQIPALCREGMGLVISPLIALMDDQVAGLRQLGINAAALHSELEGDEAA
KIRSDLANGRIDLLYISPERLLSSGTLDRLVRIPLSVIAIDEAHCISAWGHEFRPEYRAL
TALPRHFPHVPRIALTATADERTREDILAALDMPHAEVLVSSFHRPNLNISVQPKASETR
QLITALERHKDAASIVYCGSRARTERMATSLRERGWPALAYHAGLSPIEKRAALLRFRSG
EPLVIVATIAFGMGIDRPDVRAVVHLDMPASPEAYYQQIGRAGRDGLPSDTLLLYGGEDM
ARARYWLDQSAAPESEKRIMRSRLEAMIALTETTGCRTRALLHCFGEELAEPCGHCDNCL
HPVLTFNGTEAARKLLSAVYRTGQCFGALHVIGVLRGKTTEAITRNGHDKLTVWGIGKDK
SEQFWRGVVRQLIARGALRTEGQYGGLILNQNVARPILRGEEEVHLRADPVVETNSRLSD
RGSQSSGIALTEDSKALFDALRQWRREEAQEQEIPPYVIFHDSVLRDIAMEKPSDLDELG
DIKGVGRSKLERYGEAVLEVLETAQA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaaccggctccatatccacgccctctcagttttcacatagcaggctggaacgg
gaccggtttgctggaaagccgcctcaggaagtcctgcaggcggtttttggctttcccggt
ttccgcagtcttcaggcgcaagccgttgaatgcgttatggaaggcagagatacactggtg
cttatgccaaccggcggcggcaaaagtgtatgctaccaaatacccgccctgtgccgcgaa
ggcatggggctggttatttccccccttattgcccttatggatgatcaggttgcgggcctg
cgccaacttggcatcaatgctgcggccctccactctgaactggaaggggatgaagcagct
aaaatccgctcagatctggcaaatgggcgcatagatctgctgtatatctctcccgaacgc
ctgctttcatccggcacgctggaccggctggtgcgtataccgctttcggttattgccatt
gatgaagcccattgtatttcggcatgggggcatgagttccggccagaataccgcgcgctt
acggcattgccgcgccattttccgcatgtgccacgcattgcccttactgccacagcagat
gaacgcacgcgggaagatattctggcggcactggatatgccgcatgccgaagtgctggtt
tccagctttcatcggcctaatctcaacatttccgtacagcccaaagcgtctgaaacgcgc
cagcttattacagcgctagagcggcataaggatgccgccagtattgtatattgcggcagc
cgtgctcggacggagcgcatggccacttctctgcgtgaacgcgggtggcctgctttggct
taccatgcagggctttcccctatagaaaaacgtgctgcattgctgcgttttcgttctggt
gagccccttgttattgtggccacaattgcctttggcatgggcatagacaggccagacgta
cgcgccgttgtgcatttggatatgccagcctcgcccgaagcctattaccagcaaattggc
cgggccgggcgcgatggcctgccgtctgacacactccttctttacggcggggaggacatg
gcccgcgcccgctactggctagatcaatctgccgcaccagaaagcgaaaagcggattatg
cgcagccggttggaagccatgatagcgctgaccgaaaccactggctgccgcacccgcgcc
ttactgcattgttttggtgaggaactggccgaaccctgtggccattgtgataactgccta
cacccggtgctgacattcaatggcaccgaagcagcccgtaagctgctttctgccgtgtat
cgcacagggcaatgctttggtgcgctgcatgttatcggtgtattgcgcggcaaaaccaca
gaagccattacgcggaatggacatgacaagctgaccgtatggggcattggcaaggataaa
agcgagcaattctggcgcggcgtggtgcgccagcttatagcccgtggcgccttgcgcaca
gaaggccagtacggcggcctgattttaaaccagaatgtagcccggcccattttacgtggt
gaggaagaagttcacttacgagcagaccctgtagtggaaacaaacagccggttatcagat
cgtggcagccaaagctcaggcattgcccttacagaagatagcaaagccctgtttgatgcc
ttgcgccaatggcgccgggaagaagcgcaggagcaggagattccgccttacgttatcttc
catgattccgtgctgcgcgatatcgccatggaaaaaccctcagacctggatgaactgggc
gatatcaaaggggtagggcgctccaagctggaacggtacggagaagccgtgctggaggtt
cttgaaacagcgcaggcatga
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