Acetobacter pasteurianus IFO 3283-03: APA03_20310
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Entry
APA03_20310 CDS
T01812
Name
(GenBank) DNA polymerase III exonuclease epsilon subunit like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apf
Acetobacter pasteurianus IFO 3283-03
Pathway
apf03030
DNA replication
apf03430
Mismatch repair
apf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APA03_20310
03430 Mismatch repair
APA03_20310
03440 Homologous recombination
APA03_20310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apf03032
]
APA03_20310
03400 DNA repair and recombination proteins [BR:
apf03400
]
APA03_20310
Enzymes [BR:
apf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APA03_20310
DNA replication proteins [BR:
apf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APA03_20310
DNA repair and recombination proteins [BR:
apf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APA03_20310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DUF485
DNApol_Exo
HTH_8
WHD_ORC
Motif
Other DBs
NCBI-ProteinID:
BAI03206
LinkDB
All DBs
Position
2212196..2213209
Genome browser
AA seq
337 aa
AA seq
DB search
MIIFITFIFISSSINAFLAYRLNRSITQWILAGIIFPFFSFVLLWSLPKRGESKVDKVDK
VDKVDKVDKVDKVDKVDGNLPQKESEHILENIRKNKVENEKLIEIANRIREEKISKNKLY
IKGKNKPLFVDVETTGLHSDDQIVSICMILLYADKSQELQKLTYKSLYYIFDPCKKSHPI
AEGIHGYNDWTLRHQNLFEEKMEHILSFIEESDVIVAHNVNFDMKFIRNSFANAKIDIGK
IGTMCTMEMHGGSLSACSKRLGIQRKTSIHDAAEDVLMCMCLYLEKMSNINVLDMYHSFT
LPKLKNFIEPPPVPDGKLPRRNNIKKRNEILGEKFIK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgattatttttattacttttattttcatatcatcctcaataaatgcctttttagcatac
cgcctaaatagaagtattactcagtggatactcgctggaataatatttccatttttttca
ttcgtattgttgtggtctttacctaaaagaggagaaagcaaggtcgataaggtcgataag
gtcgataaggtcgataaggtcgataaggtcgataaggtcgataaggtcgatggtaatctg
cctcagaaagaatctgaacacattttagagaatattaggaaaaataaagtggaaaatgaa
aaactaatcgaaattgccaatagaataagagaggaaaaaatatcgaaaaacaaactttat
ataaaagggaaaaataaacctttatttgttgatgttgaaacaactggtcttcatagtgat
gatcaaattgttagcatatgtatgattttattatatgccgataaaagccaagaactgcaa
aagctaacatataaaagtttatattatatatttgacccttgtaaaaaaagtcatcctata
gctgaaggtatacatggatataatgactggacattaaggcatcaaaatttatttgaagaa
aaaatggagcatatattatctttcatagaagaaagtgatgttatagttgcgcataatgtc
aattttgacatgaaattcatccgaaattctttcgcaaacgctaaaatagatatcggtaag
attggtacaatgtgcacaatggaaatgcatggaggtagcttatctgcatgctctaaaaga
ttgggaatacaaagaaaaacatcaattcatgatgcagctgaagatgttctcatgtgtatg
tgtctatatttggaaaagatgagcaatattaatgttttagatatgtaccatagctttact
cttccaaagctgaaaaattttattgaaccgcctcccgttccagatggaaaacttccccgt
agaaataatatcaaaaaacgtaatgaaattttaggagaaaaatttattaaataa
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