| Entry |
|
|---|
| Symbol |
uvrD_rep
|
|---|
| Name |
(GenBank) DNA helicase II UvrD/Rep
|
|---|
| KO |
| K16898 | ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] |
|
|---|
| Organism |
apf Acetobacter pasteurianus IFO 3283-03
|
|---|
| Brite |
KEGG Orthology (KO) [BR:apf00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:apf03400]
APA03_26100 (uvrD_rep)
Enzymes [BR:apf01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA03_26100 (uvrD_rep)
DNA repair and recombination proteins [BR:apf03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APA03_26100 (uvrD_rep)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(2823872..2827444)
|
|---|
| AA seq |
1190 aa
MSISAQKALQKAISQANAQQALASDPSASVFVSASAGSGKTKLLIDRLLRLMLPRLAEDG
SILPGSSPARILCLTFTKAAAAEMSIRLQKRLGRWVTLSDEELDKELAGLYVPCTEETRR
RARALFAEVLDLPGGMRIGTIHAFCQSLLRRFPLEASMNPHFTVMEETDASLALQACVEA
ILGQQKEGVISSLAGQISLGDFIFISGVLRKDERSSSLLKLVVEDFDKAEAVLCQILGLS
PDILHGSTSEFLEKSCTNFPEEQNLREGFQILSEEGSEAIKRNAFSLLDWLALPASERAA
QWSVWRNGFLTKEGKLRSVGLISKKLSEKYSDISLYIQKESERISKVEEHLRARKLAEMG
SALLKMAAAVSSLYTTQKARHGQIEYDDLIQRALGLLREPGAAWVMYKLDGGIDHLLLDE
VQDTSPEQWRIAGDLTEEFFAGLGGRSEDEPPRTIFAVGDYKQSIYGFQGADPDSFREWR
QKFKKRVQDAHLLWREPELTVSFRSTAPVLKLVDAVFADPEAAKGVVEEPGQIMEHITAR
PGEGGRVELWPLVEAEKEEDIISPWEPAQGNATRQSPRQKLADAVAGYIFRQLNQKPLSG
QKPLTPGDVLVLVPRRSPFVGMLVRALKGHNIPVVTLVRTGLAEHLAVQDMLSLCAALLL
PQDDLTLACVLTSPLGGVSDNSLMALAAGREKGEPLWSALRERHAEQSDWKQAWNFLNGL
FRQVDYLTPYEFLSAALGPGGARARFLARLGPEAAEPIDELLSAAIRYQDQHPPSLQGFL
HWMRHSEETVKREAEAGGDSVRIMTAHGSKGLQARLVILPDTVGLPRFEERLFWAHDKKQ
NIDVPLYVPRNALSVGLTRSLKDVMRSRVVEEYNRLLYVALTRAADRLVVCGWKPGRNVP
AESWYERCRIGFEKAGATEIDFQEGGWSGSMLLLEETPQEEVNPKKSVPTSVEKSEDTAL
LPQWMGTAPLWKPTLPEAESPLARPLAPSKPDDAMLGPLPPVRSPLDIAAVTPAKAREAA
FRRGNLVHSLLQFLPACSAEQQPAMAHQWLARPASGLSSHEAAELAQQVIAVLRLPELAD
LFDPSARAEQRLAGVAGGQVIVGQVDRLRVLPNKVLVCDFKTGRHAPRGVEDTPVLYLRQ
MAAYRALLQGIWPDRPVVCVLVWTEMPRADVLPDALLDKYAPGILPAAVS |
|---|
| NT seq |
3573 nt +upstreamnt +downstreamnt
atgagcatatctgcacagaaggctttacaaaaagctatttctcaggccaatgcgcaacag
gccctggcatcggatccttcagcatcagtttttgtttctgcttctgcgggaagcggtaaa
accaaactgcttattgatcgcctcttgcgcctgatgttgccgcgtttggcagaagatggt
tctatcctgcccggaagttctcctgcccgtattttgtgtctgacttttaccaaggcagcc
gcagcagaaatgtctattcgtctgcaaaagcgccttggccgttgggtaacattatcagat
gaagaattagataaagaactagccgggttgtacgttccctgcacagaggaaacacggcgg
cgtgcacgggcattatttgcagaagtgcttgatcttccagggggtatgcgtattggaaca
atccatgcattttgccaatctctgttgcggcgttttcctcttgaagcttccatgaatccg
cactttacggttatggaagaaacagatgcctccttggctttgcaggcgtgtgtagaagct
attttaggtcagcagaaagaaggtgttatctcttccttggctggtcagatatctttggga
gattttatttttatttcaggtgttttgagaaaagatgagagatcatcttccttgttgaaa
cttgttgtggaagattttgataaggctgaggctgtattatgccagatactagggttgtcg
cccgatatactacatggaagcacttctgaatttcttgaaaaatcatgcacgaactttcca
gaagaacaaaatttaagagaggggtttcagattctttctgaggagggatccgaagcaata
aaaaggaatgctttttctcttttggattggttggccctgcctgcatcagaacgtgcagca
caatggtctgtgtggcgcaatggttttcttacaaaagagggaaaactacgctctgttggt
ttgatttctaaaaaactttctgaaaaatactctgatatttcactctatattcaaaaagaa
tctgaacgtatttccaaggtagaggaacatctgcgcgctcgaaaactggccgaaatggga
agcgcattgcttaagatggcagcggctgtttctagcctctatacaacgcaaaaagcacgt
catggtcaaattgagtatgatgatcttattcaacgtgcattagggcttttgcgagaacct
ggtgctgcatgggtgatgtataagctggatggcggcatagaccatttattgctggatgag
gtgcaggatacctctcctgagcaatggcgtattgcaggcgatctgacagaagaatttttt
gcaggccttggtgggcggagtgaagatgaaccgcctcggactatttttgccgtaggggat
tataagcaatccatttacggatttcagggggcagatcctgattcttttcgggaatggcgt
cagaagttcaaaaagcgtgttcaggatgcacatttattatggcgtgagcctgaactcacg
gtttctttcagatcaaccgcaccagttcttaaacttgttgatgctgtttttgcagatcca
gaggcagctaaaggggttgtggaagaacccggtcaaattatggaacatattactgcgcgt
cccggcgaaggtgggcgtgtagaattatggccgttggttgaggccgaaaaggaagaagat
attattagcccgtgggagccagcacaagggaatgcaacgcggcagagcccacgccagaaa
ttggcagatgctgtagcggggtatattttcaggcagttaaatcaaaaacccttatctgga
caaaagcctttaacgccgggtgatgttttggttcttgtgccgcgtcgttcaccatttgtc
ggaatgctcgttcgtgccttgaaaggccataacattcctgtagttacgcttgtgcgtaca
ggattggccgagcatctggctgtgcaggacatgctttctttgtgcgcagcactcctgttg
ccacaagatgatttaacattagcttgtgtgcttacttctccgctaggtggtgtgtcggac
aacagcttgatggctttggctgctgggcgtgaaaaaggagaaccgttgtggtcagcactt
cgagagcgtcatgcagagcagtcagattggaaacaggcttggaattttctgaatggtttg
ttcagacaggtagattatttaacgccctatgagtttctttctgctgcattggggccgggg
ggtgcgcgtgcacggtttcttgcccgattgggaccagaagcagcggaaccaattgatgaa
ctactttctgcagcaataaggtatcaggatcagcatccaccttctttgcaggggtttctg
cattggatgcgtcactctgaagaaaccgtgaagcgggaagcagaagctggcggagattct
gtaagaatcatgacagctcatggttctaaagggttacaggcccgtctggtcattttgcca
gatactgttggtctcccacgttttgaggaaagattgttttgggcgcatgataaaaaacaa
aatatagatgtgcccttgtatgtgccgcgtaatgctttgtctgttggcttaacccgtagc
ctaaaagacgtgatgcgtagccgtgtggtagaggaatataatcgcctgctgtacgtagcg
cttacacgtgcggcagatcggctggttgtttgtggctggaagccgggacgcaatgtgcca
gcagaaagttggtacgaaagatgccgaattggttttgaaaaagcaggtgcgacagaaata
gactttcaggaaggtggatggtctggctccatgctgcttctggaagagacgccacaggaa
gaagtcaaccccaaaaaatctgtcccgacttctgttgagaagagcgaagatacagccttg
ctaccgcaatggatgggaactgctccgttgtggaaacctactttgccagaagctgaaagc
ccgctggcgcgcccgttggcaccaagtaaaccagatgatgccatgttggggccgttaccc
cctgtacgttcgccattggacattgctgccgtaacgccagctaaagcacgtgaggcagct
tttcggcgtggtaatctggtacattctttgttgcagtttttgcctgcctgttcggcagag
cagcaacctgccatggcgcatcagtggttggcgcggccagcaagtggtttgtcatcacat
gaagctgccgaacttgcacaacaggttattgcagttttgcggctgcctgaactggcagat
ctgtttgatccgtctgcacgggcggaacagcgtttggccggtgtggcgggcgggcaagtt
attgtggggcaggttgaccgtttacgtgtgctgcccaacaaagtgttggtgtgtgatttt
aaaaccggccgccatgccccccgtggggtagaggatacacctgttctatacctccggcag
atggcagcttatcgtgcccttctgcaaggcatatggcccgatcggcccgtagtttgtgtt
ttggtctggacagaaatgccacgtgcagatgttctgccagatgcgttgctggataagtat
gcgcccggcattttgcctgcggctgtatcttga |
|---|
