Acetobacter pasteurianus IFO 3283-12: APA12_11460
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Entry
APA12_11460 CDS
T01814
Symbol
dnaC
Name
(GenBank) DNA polymerase III delta prime subunit DnaC
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
apg
Acetobacter pasteurianus IFO 3283-12
Pathway
apg03030
DNA replication
apg03430
Mismatch repair
apg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APA12_11460 (dnaC)
03430 Mismatch repair
APA12_11460 (dnaC)
03440 Homologous recombination
APA12_11460 (dnaC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apg03032
]
APA12_11460 (dnaC)
03400 DNA repair and recombination proteins [BR:
apg03400
]
APA12_11460 (dnaC)
Enzymes [BR:
apg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APA12_11460 (dnaC)
DNA replication proteins [BR:
apg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APA12_11460 (dnaC)
DNA repair and recombination proteins [BR:
apg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APA12_11460 (dnaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
Mg_chelatase
AAA_33
AAA_22
nSTAND3
AAA_16
AAA_25
AAA_18
AAA_24
Rad17
NTPase_1
TruB_C
RNA_helicase
DUF6344
Motif
Other DBs
NCBI-ProteinID:
BAI20565
LinkDB
All DBs
Position
1204534..1205478
Genome browser
AA seq
314 aa
AA seq
DB search
MQEPRLASLQLRGHQAALQAFRQAMQGGRLPHAWLITGPPGIGKATFAFRLARILLGGED
ELSPAGRRVSAATHADLLVVARGFDEKRQKYRSEIVADDVRPINSFLRRTAAEGGWRVVI
VDGAEYMNRSAANAVLKILEEPPPATVLLLTCSAPGRLLPTIRSRCRKLELASLDAADMS
AVLRAQAPDASDTEIQRVMAEAHGAPGRALALLADKGGEIASLVHEVVQGITPLRSYEVA
ETILRRDYGFSLFFSLLSDTLQIQARQAARQGNPQCVALANAWEATMRKHAETERFNLDK
QEALLEAMTIASRE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggaaccacgcttggcatctttgcaactgcgtgggcatcaggctgctttgcaggcg
tttcggcaggccatgcagggtgggcgcttgccccatgcgtggctgattacggggccaccg
ggcattggcaaggccacattcgcgttccggctggcacgcatattgctgggtggggaggat
gaactgagccccgctgggcggcgcgtttctgccgccactcatgcagatttgctggtggtt
gcccgcgggtttgatgaaaaacgccagaaataccgtagtgagattgtggccgatgatgtg
cgccccattaactcctttttgcggcgcacagcggcagaaggtgggtggcgcgttgtgatt
gtggatggcgcagagtacatgaatcgcagtgcggccaacgccgtgctgaaaattctggaa
gagccaccacccgctacggtattgttgttaacctgttctgctccggggcggcttttgccc
accatccgtagccgatgccgcaagttggaactggcgtcgctggatgcggcagatatgtct
gccgtgctgcgggcacaggctccagacgcttcggatacagaaatacagcgtgttatggca
gaagcccacggcgcgccggggcgtgctctggcgttgctggcagataagggtggtgaaatt
gccagccttgtgcacgaagtggtgcagggtattacgccattacgcagctatgaggttgca
gaaaccattttacgtagggattatggtttcagtctgtttttcagcctgttatcagacaca
ctccagatacaggcccgtcaggcggcgcggcagggcaacccgcaatgtgtggccttggcc
aacgcgtgggaagccaccatgcgcaagcacgccgagacggaacgctttaatctggataaa
caggaagccctgcttgaagctatgacgattgcgagccgagaatga
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