Acetobacter pasteurianus IFO 3283-12: APA12_21360
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Entry
APA12_21360 CDS
T01814
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apg
Acetobacter pasteurianus IFO 3283-12
Pathway
apg03410
Base excision repair
apg03430
Mismatch repair
apg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APA12_21360 (recJ)
03430 Mismatch repair
APA12_21360 (recJ)
03440 Homologous recombination
APA12_21360 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apg03400
]
APA12_21360 (recJ)
DNA repair and recombination proteins [BR:
apg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
APA12_21360 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
APA12_21360 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
APA12_21360 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
CDC45
Motif
Other DBs
NCBI-ProteinID:
BAI21523
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Position
2319442..2321274
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AA seq
610 aa
AA seq
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MQSSTLQLTEHSEEASSPAVLGVEASLIGRRWAWRAGAEDPALMRLGAALAQQLGIPEIV
GRLLAMRQITPDQASHFLEPKLRALMPDPSSLTDMDKAADRMAKAVQNREVIGIFGDYDV
DGACASAILASFFEELGCTVHTHIPDRMTEGYGPNVAALDNLVAQGASILICVDCGTASA
DILSQVTDKADVIVLDHHKSEDALPPILATVNPNRPDCSSGLHHICAAALAFLAAVATTR
DLRRADWFTADQPPPDLMRQLDLVALATVCDVMPLHGLNRAFVTQGLKIMARRQRTGLNA
LMEIAGVTKAPDAFSCGFALGPRINAGGRIAEAALGLRLLRCPDSFEARQMAERLDAVNR
RRQGVEADILDRAMQQAEAQKEAGHAVILLAGKDWHPGVVGIVAGRIKERFNRPALVGAE
QEDGTIKGSGRSVPGLDLGTVIIAARQAGMLKTGGGHAMAAGFSLTADKLEDFHTFLDTR
LAQAATLPEKVPLTVDAVVSISGATAELAQDMGALAPFGAGNPEPLLAIPRVTVIRADRI
GRDGNTLRLLLKGENNGRLKALLFRAHENPLAAKLEDTTRPALHLAGYLRAESWNGRTDA
TFFIQDAAAA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcagcaccttgcaacttaccgaacattctgaagaagcttcctcccctgctgta
ttgggggtggaagccagcttgattgggcggcgttgggcttggcgtgccggagcagaagat
cctgctcttatgcgcttgggtgctgctttggcccaacaactgggtattccagaaattgtt
ggccgtctgctggccatgcgtcagatcacaccagatcaggcctctcattttctagagccc
aagttgcgggcacttatgcccgatccttccagccttacggatatggataaagctgccgac
cgcatggcaaaagctgtccagaaccgtgaagtaattggtatttttggtgattatgacgtg
gatggtgcctgcgcctccgccattcttgcctctttttttgaagaactcggctgcaccgtt
catacccatatcccagatagaatgaccgaaggatatggccctaacgtagccgcgctggat
aatttggtggcgcaaggcgcttccatattgatttgtgtagattgcggcacagcctcggca
gatattctgtctcaagtcacagacaaagctgatgtgattgtgctggaccatcacaaatcg
gaagatgcccttccccctattctggcaacagttaaccctaaccggcctgactgttcctct
ggcttgcaccatatctgtgccgcagccctcgcctttcttgccgcagttgccactacgcga
gacctaaggcgtgcagactggtttacagcagaccaacctccgcctgatcttatgcgccag
cttgatctggtggccttggcaacggtttgtgatgttatgcccctgcatgggcttaaccgc
gcctttgtaacgcaagggcttaaaattatggcccgccgccaacgcacgggcctgaatgcc
cttatggaaattgctggcgttaccaaagctccggatgctttttcctgcggctttgcatta
gggccacgcatcaatgcaggtggccgtattgcagaagcagctttaggcctgcgcctgctc
cgttgcccagatagctttgaagcccgccagatggctgaacgtctggatgccgtaaaccgc
cgcagacaaggtgttgaggccgatattctggaccgtgccatgcaacaggctgaagcccag
aaagaagctgggcacgctgttattctgctggccggaaaagattggcacccaggtgttgtg
ggtattgtagcagggcgtattaaggaacgcttcaatcggcctgcccttgttggggccgaa
caggaagatggcaccattaaaggttctggccgttctgttcccgggttagatcttggcacc
gtgattattgcagcccgtcaggctggaatgctaaaaacaggcggcggccacgccatggct
gctggcttttcccttaccgctgataagctggaagattttcatacttttctggatactcgg
ttagcacaggcggctacgcttccagaaaaagtgcctcttaccgtagatgcggtggtatcc
atttctggcgccacagcagaactggcgcaggatatgggggcccttgccccatttggtgcc
ggaaacccggagcctctgttagctataccccgtgtaacagttatacgggcagaccgcatt
ggccgagacggcaacacgctgcgcctgcttttaaagggtgaaaataatggccggttgaaa
gcactgctgttccgcgcgcatgaaaaccctttagcggccaaactggaagacacaacacgc
cctgccctacatctcgccgggtatctacgcgcagaaagctggaatggcagaacagacgcc
accttctttattcaggacgctgcggctgcctga
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