Acetobacter pasteurianus IFO 3283-12: APA12_24370
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Entry
APA12_24370 CDS
T01814
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apg
Acetobacter pasteurianus IFO 3283-12
Brite
KEGG Orthology (KO) [BR:
apg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apg03016
]
APA12_24370 (truB)
Enzymes [BR:
apg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APA12_24370 (truB)
Transfer RNA biogenesis [BR:
apg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APA12_24370 (truB)
Prokaryotic type
APA12_24370 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAI21813
LinkDB
All DBs
Position
complement(2636790..2637740)
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AA seq
316 aa
AA seq
DB search
MVFDESHTGVFMRRRRGRPLNGWLIVDKPSGMTSTQVVGRAKRLFDAQKVGHGGTLDPLA
TGLLPLAFGAATKTVPYVMDGTKVYRFTLKMGEARDSDDADGNVIGTSDVRPSDEELRAA
LPALTGDIMQVPPVFSALKVGGERSYDMAREGRPPELPPRPARVDRFELIERPDRDTAVF
EVESGKGVYMRALARDVALACGTVGHITVLRRLRVGPFTEADAIVLDKITPNDDNAHASP
ELLRPVSTALADIPALALTQDEAVLLRHGQALGLVDLMGRIPQTAEEGGVVRVMDGEHVL
GIGRLEDGWLKPVRIL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgatgaatcgcatacgggagttttcatgcgacgcagacgtgggcggcccctt
aacggctggcttatagtagacaagccttccggcatgacatcaacccaagtggtggggcgc
gccaagcggctgtttgatgcacaaaaggtagggcatggcggcacattggacccgttggcg
acggggctgctgcctttggcttttggggccgccaccaaaaccgtgccttatgttatggac
ggcaccaaggtgtaccgtttcacccttaaaatgggtgaggcacgtgatagcgatgatgcc
gatggtaatgttattggtacatctgatgtgcgtccttctgatgaagaactacgggcagcc
ctgccggcgcttacaggcgatatcatgcaggtgcctcccgttttttctgccctgaaagtg
ggtggggagcgttcctacgatatggcgcgggaaggccgcccgccagaattgccgccacgg
cccgcgcgggtggatcggtttgagctgattgaacggccagatcgggataccgcagtgttt
gaggtcgaatccggcaagggtgtttacatgcgtgcgctggcgcgtgatgtggctttggca
tgcggaactgtggggcatattactgtgctacgccgcctgcgtgtggggccttttacagaa
gccgatgcgattgtgctggacaaaatcaccccaaacgacgacaacgcccatgcttcaccg
gaacttctgcgtccggtctcgaccgcgctggccgacatcccggcgctggccttgacacag
gatgaagcagttctgctacggcacgggcaagctctcggccttgttgatctgatggggcgt
atcccacagaccgccgaggaggggggcgttgtgcgtgttatggacggtgagcacgtgctg
ggtattggccgtctggaagacggatggttgaagccggtacggattctctaa
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integrated database retrieval system
