Acetobacter pasteurianus IFO 3283-12: APA12_26100
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Entry
APA12_26100 CDS
T01814
Symbol
uvrD_rep
Name
(GenBank) DNA helicase II UvrD/Rep
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
apg
Acetobacter pasteurianus IFO 3283-12
Brite
KEGG Orthology (KO) [BR:
apg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apg03400
]
APA12_26100 (uvrD_rep)
Enzymes [BR:
apg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APA12_26100 (uvrD_rep)
DNA repair and recombination proteins [BR:
apg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
APA12_26100 (uvrD_rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAI21975
LinkDB
All DBs
Position
complement(2821209..2824781)
Genome browser
AA seq
1190 aa
AA seq
DB search
MSISAQKALQKAISQANAQQALASDPSASVFVSASAGSGKTKLLIDRLLRLMLPRLAEDG
SILPGSSPARILCLTFTKAAAAEMSIRLQKRLGRWVTLSDEELDKELAGLYVPCTEETRR
RARALFAEVLDLPGGMRIGTIHAFCQSLLRRFPLEASMNPHFTVMEETDASLALQACVEA
ILGQQKEGVISSLAGQISLGDFIFISGVLRKDERSSSLLKLVVEDFDKAEAVLCQILGLS
PDILHGSTSEFLEKSCTNFPEEQNLREGFQILSEEGSEAIKRNAFSLLDWLALPASERAA
QWSVWRNGFLTKEGKLRSVGLISKKLSEKYSDISLYIQKESERISKVEEHLRARKLAEMG
SALLKMAAAVSSLYTTQKARHGQIEYDDLIQRALGLLREPGAAWVMYKLDGGIDHLLLDE
VQDTSPEQWRIAGDLTEEFFAGLGGRSEDEPPRTIFAVGDYKQSIYGFQGADPDSFREWR
QKFKKRVQDAHLLWREPELTVSFRSTAPVLKLVDAVFADPEAAKGVVEEPGQIMEHITAR
PGEGGRVELWPLVEAEKEEDIISPWEPAQGNATRQSPRQKLADAVAGYIFRQLNQKPLSG
QKPLTPGDVLVLVPRRSPFVGMLVRALKGHNIPVVTLVRTGLAEHLAVQDMLSLCAALLL
PQDDLTLACVLTSPLGGVSDNSLMALAAGREKGEPLWSALRERHAEQSDWKQAWNFLNGL
FRQVDYLTPYEFLSAALGPGGARARFLARLGPEAAEPIDELLSAAIRYQDQHPPSLQGFL
HWMRHSEETVKREAEAGGDSVRIMTAHGSKGLQARLVILPDTVGLPRFEERLFWAHDKKQ
NIDVPLYVPRNALSVGLTRSLKDVMRSRVVEEYNRLLYVALTRAADRLVVCGWKPGRNVP
AESWYERCRIGFEKAGATEIDFQEGGWSGSMLLLEETPQEEVNPKKSVPTSVEKSEDTAL
LPQWMGTAPLWKPTLPEAESPLARPLAPSKPDDAMLGPLPPVRSPLDIAAVTPAKAREAA
FRRGNLVHSLLQFLPACSAEQQPAMAHQWLARPASGLSSHEAAELAQQVIAVLRLPELAD
LFDPSARAEQRLAGVAGGQVIVGQVDRLRVLPNKVLVCDFKTGRHAPRGVEDTPVLYLRQ
MAAYRALLQGIWPDRPVVCVLVWTEMPRADVLPDALLDKYAPGILPAAVS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatctgcacagaaggctttacaaaaagctatttctcaggccaatgcgcaacag
gccctggcatcggatccttcagcatcagtttttgtttctgcttctgcgggaagcggtaaa
accaaactgcttattgatcgcctcttgcgcctgatgttgccgcgtttggcagaagatggt
tctatcctgcccggaagttctcctgcccgtattttgtgtctgacttttaccaaggcagcc
gcagcagaaatgtctattcgtctgcaaaagcgccttggccgttgggtaacattatcagat
gaagaattagataaagaactagccgggttgtacgttccctgcacagaggaaacacggcgg
cgtgcacgggcattatttgcagaagtgcttgatcttccagggggtatgcgtattggaaca
atccatgcattttgccaatctctgttgcggcgttttcctcttgaagcttccatgaatccg
cactttacggttatggaagaaacagatgcctccttggctttgcaggcgtgtgtagaagct
attttaggtcagcagaaagaaggtgttatctcttccttggctggtcagatatctttggga
gattttatttttatttcaggtgttttgagaaaagatgagagatcatcttccttgttgaaa
cttgttgtggaagattttgataaggctgaggctgtattatgccagatactagggttgtcg
cccgatatactacatggaagcacttctgaatttcttgaaaaatcatgcacgaactttcca
gaagaacaaaatttaagagaggggtttcagattctttctgaggagggatccgaagcaata
aaaaggaatgctttttctcttttggattggttggccctgcctgcatcagaacgtgcagca
caatggtctgtgtggcgcaatggttttcttacaaaagagggaaaactacgctctgttggt
ttgatttctaaaaaactttctgaaaaatactctgatatttcactctatattcaaaaagaa
tctgaacgtatttccaaggtagaggaacatctgcgcgctcgaaaactggccgaaatggga
agcgcattgcttaagatggcagcggctgtttctagcctctatacaacgcaaaaagcacgt
catggtcaaattgagtatgatgatcttattcaacgtgcattagggcttttgcgagaacct
ggtgctgcatgggtgatgtataagctggatggcggcatagaccatttattgctggatgag
gtgcaggatacctctcctgagcaatggcgtattgcaggcgatctgacagaagaatttttt
gcaggccttggtgggcggagtgaagatgaaccgcctcggactatttttgccgtaggggat
tataagcaatccatttacggatttcagggggcagatcctgattcttttcgggaatggcgt
cagaagttcaaaaagcgtgttcaggatgcacatttattatggcgtgagcctgaactcacg
gtttctttcagatcaaccgcaccagttcttaaacttgttgatgctgtttttgcagatcca
gaggcagctaaaggggttgtggaagaacccggtcaaattatggaacatattactgcgcgt
cccggcgaaggtgggcgtgtagaattatggccgttggttgaggccgaaaaggaagaagat
attattagcccgtgggagccagcacaagggaatgcaacgcggcagagcccacgccagaaa
ttggcagatgctgtagcggggtatattttcaggcagttaaatcaaaaacccttatctgga
caaaagcctttaacgccgggtgatgttttggttcttgtgccgcgtcgttcaccatttgtc
ggaatgctcgttcgtgccttgaaaggccataacattcctgtagttacgcttgtgcgtaca
ggattggccgagcatctggctgtgcaggacatgctttctttgtgcgcagcactcctgttg
ccacaagatgatttaacattagcttgtgtgcttacttctccgctaggtggtgtgtcggac
aacagcttgatggctttggctgctgggcgtgaaaaaggagaaccgttgtggtcagcactt
cgagagcgtcatgcagagcagtcagattggaaacaggcttggaattttctgaatggtttg
ttcagacaggtagattatttaacgccctatgagtttctttctgctgcattggggccgggg
ggtgcgcgtgcacggtttcttgcccgattgggaccagaagcagcggaaccaattgatgaa
ctactttctgcagcaataaggtatcaggatcagcatccaccttctttgcaggggtttctg
cattggatgcgtcactctgaagaaaccgtgaagcgggaagcagaagctggcggagattct
gtaagaatcatgacagctcatggttctaaagggttacaggcccgtctggtcattttgcca
gatactgttggtctcccacgttttgaggaaagattgttttgggcgcatgataaaaaacaa
aatatagatgtgcccttgtatgtgccgcgtaatgctttgtctgttggcttaacccgtagc
ctaaaagacgtgatgcgtagccgtgtggtagaggaatataatcgcctgctgtacgtagcg
cttacacgtgcggcagatcggctggttgtttgtggctggaagccgggacgcaatgtgcca
gcagaaagttggtacgaaagatgccgaattggttttgaaaaagcaggtgcgacagaaata
gactttcaggaaggtggatggtctggctccatgctgcttctggaagagacgccacaggaa
gaagtcaaccccaaaaaatctgtcccgacttctgttgagaagagcgaagatacagccttg
ctaccgcaatggatgggaactgctccgttgtggaaacctactttgccagaagctgaaagc
ccgctggcgcgcccgttggcaccaagtaaaccagatgatgccatgttggggccgttaccc
cctgtacgttcgccattggacattgctgccgtaacgccagctaaagcacgtgaggcagct
tttcggcgtggtaatctggtacattctttgttgcagtttttgcctgcctgttcggcagag
cagcaacctgccatggcgcatcagtggttggcgcggccagcaagtggtttgtcatcacat
gaagctgccgaacttgcacaacaggttattgcagttttgcggctgcctgaactggcagat
ctgtttgatccgtctgcacgggcggaacagcgtttggccggtgtggcgggcgggcaagtt
attgtggggcaggttgaccgtttacgtgtgctgcccaacaaagtgttggtgtgtgatttt
aaaaccggccgccatgccccccgtggggtagaggatacacctgttctatacctccggcag
atggcagcttatcgtgcccttctgcaaggcatatggcccgatcggcccgtagtttgtgtt
ttggtctggacagaaatgccacgtgcagatgttctgccagatgcgttgctggataagtat
gcgcccggcattttgcctgcggctgtatcttga
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