Acetobacter pasteurianus IFO 3283-12: APA12_26330
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Entry
APA12_26330 CDS
T01814
Symbol
mscS
Name
(GenBank) mechanosensitive ion channel Small-conductance MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
apg
Acetobacter pasteurianus IFO 3283-12
Brite
KEGG Orthology (KO) [BR:
apg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apg02000
]
APA12_26330 (mscS)
Transporters [BR:
apg02000
]
Other transporters
Pores ion channels [TC:
1
]
APA12_26330 (mscS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
BAI21998
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Position
2850292..2852925
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AA seq
877 aa
AA seq
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MPPNLPPTLEADWAAVFCAPLLSYPFSKGCSAPMAANSPDQSLSFSPSPPQSPSLAAWLC
RLFCLFALGLGFLFPVTHARADTAAAVPQTNGLTQQDAQQLLNVLNDPQKREQFSKTLSL
MAKGLPAAQPAATPKAAPAPAAAKPQADNAVIDSDVHSELDTLQSSIHGYLNNFTSLFKD
LSVVGPWFKNEIRNPASRQTLIDAFSRALLIIGLALVLERATSIAMRKPLNSVTQHAENR
EKRLEASAETAAAADSSDAAAANDADTTQTRENDQRRGTEVLRYLVRVPYNVLHFLIKLL
PVGVCLLVGYLGAEFLTTTAQAHTVSLTLINAYAIARGLYLVVETTLAPRSPAIRLIPAS
DETAHLLTRWWNVLVAAPSIVICLSTLGSEFDLSPRGVDAMQRAVVLIQHLIIAAFIWRL
RHIVARALQPSPNMRKNALWAFAGTLAHVWWVPVMFLDMALWFVWAAHLKGGYQWILRGT
LLTFLCLVLSRVIALLAYGLQDRLFRISPTLEASYPGMQKRADFYYPFVRRIITIAIIFI
TIVCLAQSWSIPSFRFFFDSALGGRLIGAAICLLIGMTVAAVAWEVVNGLLEKQITRYTS
SAQAARAARLRTVLPIIRTVLLAVIIIFVAVTTLSQIGINVTPLLTGAGILGVGLSFGSQ
SLVKDVITGFFMLAEDAIQVGDWVTTGGIAGIVEHLSIRTLRVRSVDGDLHIIPFSSVTS
IANTARGFNQVIVHQTVDLTESSERVAKIMQDTVQEMRKEDAYKNIILSDYVDLGVDSSD
GNGAVLVGSIKTAPMMKWKVQREFYRRIANRMAAQGVKFYTPTSYSTTPPGTPVHLAMDT
MPPELLEKINQRAAQAQEEAKPSAPEAPPAAKEPPHA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaatttgcctcctaccctagaggcagattgggcggcagttttttgcgcgccc
ttattatcttacccgttcagcaaaggatgcagcgcccccatggcggccaatagcccggat
cagagtctatccttttcaccctctccgcctcagtcgccttctttggctgcatggctttgt
cgtcttttttgcctatttgcgttgggattgggttttcttttccctgttacgcatgcgcgg
gcagatacggcagcagcggttcctcaaaccaatggtctgacacaacaggacgcacagcag
ttactgaacgttctgaacgatccgcagaagcgggaacagttttccaaaaccctttccctc
atggccaagggcttacctgctgcacaaccagccgccacacccaaagcggctccagcgccc
gctgcggctaaaccacaagccgataacgctgtgatagacagcgatgtccattcagaactg
gatacgctgcaaagctctattcatggctacctaaacaacttcaccagccttttcaaagat
ttaagtgttgttgggccgtggttcaaaaatgaaatccgcaatccggcttctcggcaaact
ctgattgatgcgtttagtcgcgctctactgattattggtctcgccctcgtgttggagcgt
gccaccagcattgcaatgcgcaaaccgctgaactctgtaacgcagcatgcagaaaacagg
gaaaaacgtctggaagcctcagccgaaactgccgcagcagccgatagcagcgatgccgca
gcagcaaacgatgcggataccacgcaaacgcgtgaaaatgaccagcggcgcggcaccgag
gtgctccgttacctagtacgcgtgccatataatgtactgcattttcttatcaagctgctg
cccgttggggtgtgcctgcttgtcggctatctgggtgcagaattccttaccactacagca
caagcccacactgtttccctcacccttatcaatgcttatgccattgcgcgtgggctttat
ctggttgtggaaacaacattggcaccacgttcccctgctatccggcttattcctgcatcg
gatgaaacagcacacttgctgacacggtggtggaacgtgttggtggcagccccttccatt
gtgatctgtctttccaccttgggaagtgagtttgacctcagcccccgcggtgtggatgcc
atgcagcgtgctgtggtgctgatccagcatctgattattgctgcctttatctggcgcctg
cgccatattgtggcacgggcactgcaaccctcccccaacatgcgtaaaaatgccctatgg
gcttttgctggtacgctggcgcatgtgtggtgggtgcccgtgatgttcctggacatggcg
ctgtggtttgtctgggccgcacatcttaaaggcgggtatcagtggatcctgcgtggaaca
ctgctgacgtttctctgcttggtgctttcccgcgttattgccctgttggcatacggcctg
caggacaggctgttccgcatcagccccacgttggaagccagttatccgggcatgcaaaaa
cgggcggatttttattacccgttcgtgcgccggattatcaccattgcaattattttcatt
accattgtctgccttgctcaaagctggagcatccccagcttccgcttcttctttgattcc
gctcttggtggccgtctgattggcgcagctatctgtctgcttatcggcatgacagttgcc
gctgtggcgtgggaagtggtgaacggtctgctggaaaaacagattacccgttacacctcc
agcgcacaggccgcgcgcgcggcacgtctgcgtacagtgctgcctattatccgcactgtc
ctgctggccgttatcatcatctttgtggcggttaccacgctctcccaaattggtattaac
gtcacgcccttgctaaccggtgccggtattttgggtgttggtctttcctttggttctcag
agcttggttaaagacgttatcaccggcttcttcatgctggcggaagatgccattcaggtt
ggggattgggtaaccaccggagggattgccggtattgttgagcatctttccatccgtaca
ttgcgcgtgcgctctgtggatggtgacctacacatcattcccttctcgtccgtaacctcc
attgccaatacggcacgtgggtttaaccaggttattgtgcaccagacggtggatctgacc
gaaagcagcgaacgcgttgccaagatcatgcaggacaccgttcaggaaatgcgcaaggaa
gatgcttacaagaacatcatcctgtccgattatgttgatctgggtgttgatagttcggac
ggaaacggtgctgtgctggtgggctccatcaaaaccgcacctatgatgaagtggaaagtg
cagcgtgagttttaccgccgcattgcaaaccgcatggcagcgcagggtgtaaaattctac
acgccaacatcttactccaccacaccgcccggcacgccggtccatttggcaatggacaca
atgccgccggaactgcttgaaaaaatcaaccaacgtgcagctcaggcgcaggaagaagcc
aaaccttctgccccagaggcaccgcctgcagcaaaagaaccaccacatgcctga
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