Acetobacter pasteurianus IFO 3283-12: APA12_26680
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Entry
APA12_26680 CDS
T01814
Symbol
trmE_thdF
Name
(GenBank) tRNA modification GTPase TrmE/ThdF
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
apg
Acetobacter pasteurianus IFO 3283-12
Brite
KEGG Orthology (KO) [BR:
apg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apg03016
]
APA12_26680 (trmE_thdF)
Transfer RNA biogenesis [BR:
apg03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
APA12_26680 (trmE_thdF)
Prokaryotic type
Methyltransferases
APA12_26680 (trmE_thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GCV_T
ABC_tran
RsgA_GTPase
AAA_29
TetR_C_35
Motif
Other DBs
NCBI-ProteinID:
BAI22030
LinkDB
All DBs
Position
complement(2884456..2885787)
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AA seq
443 aa
AA seq
DB search
MAALGYQAEDTIFALSTGIERAAIAVLRVSGAGSRDILLRVCGKVPDARKAVLRKIWTNA
SVQDDLLDEALVLWFPGPRSYTGEDGFELHLHAGPAIIRAVSEALVNAGARPAEPGEFTR
RAFVNGRMDLVEAEGIADLVAAETDGQRKLALAQADGALSHLYSGWSERLKKLLAFQEAL
IDFPDEDLPPEVEDGINQEIQKLQSEMQQHVADGEHGERIRQGVVFAITGPPNAGKSSLL
NWLTGRDTAIVSSKAGTTRDALEVACILAGIKVTFVDTAGLRETDDEIEAEGVRRALFHV
KQADCVLQMFPANEAPDDVFPGAILIGNKADIGKIPKTIQGKPVLAISLKKGNGLPELYA
FLKRKVEELTAASTSGAPLLTRARHKAGVLEAVQCLQAALQQDWPELRGEELRLAMRALG
RLTGHVGVEDLLDTIFGQFCIGK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgttggggtatcaggctgaagatacaatctttgcgctttcaacaggaatcgag
cgtgcggcaattgctgttttgcgtgtaagcggagcaggcagccgagacatccttttgcgg
gtttgtggcaaggtgccagatgcgcgcaaggctgttcttcgtaaaatctggaccaatgct
tctgttcaagatgatttgctggatgaggcactggttctctggtttcccggcccgcgaagt
tatacaggtgaagatggttttgaactgcatctgcatgcagggcctgctattattcgtgct
gtttccgaagcgttggtgaatgcgggcgcacggccggcagaaccaggtgaattcacacgg
cgtgcgtttgtaaatggacgcatggatctggttgaagccgaaggcattgccgatctggtt
gcagctgaaactgatgggcaaagaaagctggccttggcgcaagctgatggtgcattaagc
cacttgtattcaggttggtctgagcgcctcaaaaagcttcttgcttttcaggaagccctt
atagatttcccagatgaagatttaccgcctgaagtggaagacggtatcaatcaggaaatc
caaaaattacagtctgaaatgcaacagcatgttgctgatggtgagcatggtgagcggata
cggcaaggggttgtctttgccattactggcccaccaaacgcaggcaaaagtagcttgtta
aattggcttacgggcagggatacagctattgtatcttccaaggcaggtacaacgcgtgat
gccttggaggttgcctgtattcttgccggcataaaagtaacgtttgttgataccgcaggt
ctgcgagaaacagatgatgagattgaggctgaaggtgtgcggcgtgcattgtttcacgtg
aaacaggcagactgtgtgttacaaatgttcccggcgaatgaagctccagatgatgtgttc
cccggtgccattttgataggtaataaggctgatattgggaaaattccaaaaaccattcag
ggtaagcctgttcttgctatcagtttaaaaaaaggaaatgggttacctgaattgtatgct
ttcctgaaaaggaaagttgaggagctcacagcagcctccacatccggtgcgccgttgctt
acgcgtgcgcggcataaggccggtgtgctggaggctgtacaatgccttcaggcagcattg
cagcaggactggccagaactgcgcggtgaagagttgcggttagctatgcgggcattgggg
cggctaactggccatgttggtgtggaagatttgctggatacgatattcggccagttttgt
attggaaagtaa
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