Anaplasma phagocytophilum HZ: APH_0064
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Entry
APH_0064 CDS
T00327
Symbol
rho-1
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aph
Anaplasma phagocytophilum HZ
Pathway
aph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APH_0064 (rho-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aph03021
]
APH_0064 (rho-1)
03019 Messenger RNA biogenesis [BR:
aph03019
]
APH_0064 (rho-1)
Transcription machinery [BR:
aph03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
APH_0064 (rho-1)
Messenger RNA biogenesis [BR:
aph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
APH_0064 (rho-1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA_25
AAA
ATPase_2
AAA_22
NACHT
DnaB_C
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ABD44227
UniProt:
Q2GLQ4
LinkDB
All DBs
Position
70587..71945
Genome browser
AA seq
452 aa
AA seq
DB search
MCGKVRRRKKAVPSAVVAEEATGSGSEEGRILNLCELKRKSTGELLAIAEELGVVSNGRM
LKQEIIFQLMKRVISEGGVAIGGGVVETLPDGFGFLRSAEANYAASSDDIYISAGQIKKF
NLRTGDIVSGEIRAPGDKERYFTLVKAYSINYTEIGKLQRYVHFDDLIPVYPEDRILLEC
NKGAGNEKKDISMRAIDIIAPLGKGQRALIVAPPRVGKTVILQQIAHSIAVNHPNMELIV
LLIGERPEEVTDMLRSVKGEVVSSTFDEPAYRHVQLAEIVIERAKRMVEHKKEVVILLDS
ITRLARAYNEVMPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIATALIETGSK
MDEVIFEEFKGTGNCEIILDRKIADKRIYPAIDISKSGTRKEDMLIESALLKKVWLLRRL
LSAMGPVEAMEFLRDKLSMAKDNNDFFEMMNS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtggcaaggttaggagaaggaaaaaggctgttcctagtgctgtagtagcagaagag
gcgacagggagtggcagcgaagaaggaagaatcctgaacctatgtgagctgaagagaaaa
agcacaggggagctactagcaatagcggaggagctaggtgtagtaagcaacggcaggatg
ctgaagcaagagataatattccagctgatgaagagagtaatcagcgaaggaggagtggca
ataggtggtggtgtagtagaaacattgccggatggatttggatttttgagatcagcagaa
gcaaattacgcggcaagtagcgatgacatctacatatcggctggtcagataaagaaattt
aacttgagaacgggtgacatagtaagtggtgagatacgtgcacctggagataaggaaagg
tattttaccttagtcaaggcgtacagcataaactacacggagataggtaagctacagagg
tatgtacactttgacgatctgattccagtatacccagaagatagaatattgctcgagtgc
aataagggtgctgggaacgagaagaaagatataagcatgcgtgctatagacataatagcg
ccactaggaaaggggcaacgtgcgctaatagtagcacctccaagggttggtaagactgta
atcttgcagcaaatcgcgcactctatagctgtaaaccaccccaacatggaactgatagtg
cttttgataggtgaaaggccagaagaagtcacggatatgttgaggtcagtaaagggagaa
gttgtaagttctacatttgatgagcctgcgtaccggcacgtacagttggcagagatagtg
atagaaagagctaagaggatggtagagcataagaaggaggtggtaatccttttagactct
ataacaagattagctagggcatataatgaggttatgccatcatcaggaaaggtgcttaca
ggtggggtagattctaatgcgctacagaggcctaagaggttttttggagcagctaggaat
atagagaatgggggatcgctcacgataatagcgactgctctaatagagacgggatcgaaa
atggatgaagtgattttcgaggagttcaagggtacaggaaactgcgagataatacttgat
cggaagatagcagataagagaatctacccagcgatagatatatctaagtctggaacaaga
aaggaagacatgctgatagaatcagcgcttctgaagaaggtatggttactgagaaggttg
ttatcagccatgggtccagttgaggctatggagtttctgagagacaagcttagcatggct
aaggataacaacgacttttttgaaatgatgaatagctaa
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