Anaplasma phagocytophilum HZ: APH_0137
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Entry
APH_0137 CDS
T00327
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aph
Anaplasma phagocytophilum HZ
Brite
KEGG Orthology (KO) [BR:
aph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aph03016
]
APH_0137
Enzymes [BR:
aph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
APH_0137
Transfer RNA biogenesis [BR:
aph03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
APH_0137
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Porin_8
RNAseD_HRDC_C
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ABD44075
UniProt:
Q2GLI9
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All DBs
Position
141529..142674
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AA seq
381 aa
AA seq
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MFICSTNDLSRFCTELLRDNPESVAIDTEFLRSFNDYYPKLCLLQIAYENKQCVIDALAE
GIDLTPLQEIFDNTQIFKVFHDCRQDLDALSLLFESLPRPIFDTQIAAMLCEYHENSVGY
SKLVEQFLGVKLNKMPFKRVDWSKRPLTESEVRYALDDVIYLYKLYGILRDILTSKGRLS
WYMEEMDCIVDSVSDNYTTILESMECYADLTEQEANIARSVVEWRERVARLLNINRNIIM
NARDVLNITKDFIADGSDSTLRKYVRELYLQDLPFSLTEIVENNKHIKQDVYNKASQERD
TLSLLSILLHSVCIEDGVSQKLVASKRDLVRAISRLPSNIMRGWRYEFFGHKVKAFIEGQ
AKLVFSVDTNGGDVQLLVDSH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgtttatttgttcaacaaatgatctatctaggttttgtacggagttattacgtgataac
cccgaaagtgtggcaatagacacggagtttttgcgtagcttcaacgactattacccaaaa
ttgtgtttactgcagatagcttatgagaataagcagtgtgtaattgatgctttagcagag
ggtattgatcttactcctctgcaggaaatttttgataacacacagattttcaaggttttt
cacgattgtaggcaggatcttgacgcgttatccctgttatttgagtctctccctaggcct
atatttgatacgcaaatagcggctatgctgtgtgagtatcacgaaaattcagtgggatac
tctaaattagttgagcagtttctaggcgtgaaactgaataagatgcccttcaagcgtgtg
gattggtcaaaaaggcctttaacggaaagtgaggtacgttacgcacttgatgatgttatt
tatctatataagctgtacggaatccttcgggatattttgacgtccaagggtaggttatcg
tggtatatggaggagatggattgcattgtagattcggtatccgataactacactacgatt
ttagagagtatggagtgttatgcagacttaactgagcaagaagctaatatagcaagatcg
gtggtagagtggagagagcgtgtagcacgtctactaaatataaatcgaaatattatcatg
aatgccagagatgtcttgaatattacaaaagactttatagcggatggcagcgacagtacc
ctcagaaaatacgtgcgcgagctatatctacaagaccttccattcagtttgactgagata
gtggagaataacaagcatataaagcaagatgtgtataataaagcgagtcaagaacgtgat
actctaagtttactgtctatattgctgcatagcgtgtgcatagaagatggtgtgtcacag
aaattagtagcatctaagagagatttggttagagccataagtcgccttcctagcaacata
atgcgtgggtggagatatgagttttttggccataaggttaaagcttttatcgaaggacaa
gccaagttggtgttttctgtcgataccaatggaggcgatgtacagcttcttgtagacagt
cattaa
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