Anaplasma phagocytophilum HZ: APH_0597
Help
Entry
APH_0597 CDS
T00327
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aph
Anaplasma phagocytophilum HZ
Brite
KEGG Orthology (KO) [BR:
aph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aph03032
]
APH_0597 (topA)
03400 DNA repair and recombination proteins [BR:
aph03400
]
APH_0597 (topA)
Enzymes [BR:
aph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
APH_0597 (topA)
DNA replication proteins [BR:
aph03032
]
Prokaryotic type
DNA Topoisomerases
APH_0597 (topA)
DNA repair and recombination proteins [BR:
aph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APH_0597 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
PGM_PMM_II
DUF2625
Motif
Other DBs
NCBI-ProteinID:
ABD43891
UniProt:
Q2GKB4
LinkDB
All DBs
Position
620600..623035
Genome browser
AA seq
811 aa
AA seq
DB search
MGVVIVESPSKAKTISKYLGKKFNVIASFGHIRDFPAKSGSVDPSNDFKMIYEIIPKSEK
HLDKIVKTVSAEKEAIYLATDPDREGEAIAWHIVEVLKEKCAIAKDVTVNRMVFNEVTKR
AVTAAVDNCRPINMDLVRAQQTRRVLDYLVGFTLSPLLWRKLPGSRSAGRVQSVALRLLC
EREYEVEQFKTQEYWDVGVDLQNQGGEKFEAVLKCYAGEKLEKFSIGTEEQAKEYAETVK
NQSYTVESVESKKTKRNPYPPFITSSLQQEASTKLGFSAKNTMMIAQKLYEGIDIGGEIV
GLITYMRTDGFYISEDAVNYIRDTIKMQFGEKYLSKSVRNYTKKVKNAQEAHEAIRPTDI
TMLPEQLSKYLTDEQLKLYTLIWKRTLATQMESAVIDQVAVDIKSSCGKISLHATGSTLS
FDGYYRVYGSEDSDKRRMLPQLREGESCELLEVHPNQHFTQPPARYSEASLVKKMEEIGI
GRPSTYATIISVLQERGYTQLEQKRFIPSERGRIVNAFLTNFFRKYVEYDFTANLEEELD
LISNGKMVWKEVLSQFWDKFISDVSSVKTIEASEILKAITRDLENYAFSSVDGESISRVC
PQCGSGELMLNIGKTSAFLGCNRYPECRYTRGIGGDGSASPADDASRILGIDEETQEEIF
LKRGPYGEYLQLGNSTKRVSLTKSAGEITVDLAKKMLSLPLVLGCYPDTDKEIKLGIGRF
GPYLFYNGVYFSIKDREDYINISHQEAVEIIDKQSDKKAKLLGQNKDGKDIYVCKGRYGF
YLKCDKTSVALKGRSEDITLEDAILLLSQKQ
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggtcatagtagagtctccttctaaggcgaagactattagtaagtacttgggg
aagaaattcaatgttattgcttcttttggccacataagggattttccagcgaagagtgga
tcagttgatccttctaatgattttaaaatgatatatgagattatcccaaaatcagaaaaa
cacctggataagatagtaaaaactgtcagtgctgaaaaagaggctatatatctcgctacg
gatccggatcgcgaaggagaggcgatagcttggcatatagtagaggttttgaaggagaag
tgtgccatagcgaaagatgttacagtgaacaggatggtgttcaatgaagtaaccaaaaga
gcagttactgctgctgttgataattgccgtcctataaatatggacttggttcgtgcgcag
caaacacgcagagtgttggattatctcgtggggtttacgctgtccccgctattatggaga
aagttaccaggcagtaggtcagcaggtagagtgcaatctgtggcgctccgtctactttgt
gaaagagaatatgaagtagagcagttcaagactcaggaatattgggatgttggagtagat
ctgcaaaaccagggtggtgagaaattcgaggccgttcttaagtgttatgcgggtgagaag
ctcgagaagttttcaataggcacagaagagcaagccaaggaatacgcagagactgttaag
aatcagagctatactgtagaatctgttgagtcgaaaaagactaagcgcaacccatatcct
ccttttatcacatcgagtctacaacaagaggcatctacgaaattggggttctctgcgaag
aataccatgatgatagctcagaagttgtatgagggtatagatatcggaggggaaatagta
ggtcttataacgtacatgcgtacagatggtttttacatttctgaagatgccgtaaactat
atacgtgatacaatcaaaatgcagtttggggagaagtatttatccaaatctgttaggaat
tacactaaaaaagtaaagaatgcacaggaagcgcacgaagctatccgtccaacagacatt
actatgctacctgagcagctatcaaaatacctcacggatgagcaattgaagctttatact
ctcatatggaaaaggacacttgctacacagatggagtctgcagtaatagatcaggtggct
gtggatattaagtcatcgtgtgggaaaataagtcttcatgcaactggatcgacgctcagt
tttgatggttattatagagtatatggttctgaggatagtgataagcgtcgcatgttgcca
caacttcgcgaaggtgagagctgcgagctgttggaagtacatcctaatcagcattttact
cagccgcctgcgcgatacagcgaagctagtttagtgaaaaaaatggaagagatcggcatt
ggtagaccttctacttatgcgacgattatttcagttttgcaggaaagggggtacactcaa
ctagagcaaaagcgttttattccaagtgagcgggggagaatagtaaacgcctttttgacg
aacttttttagaaagtacgtggagtatgactttacggctaatctggaggaagagcttgac
cttatctcaaatggaaagatggtttggaaggaggttttgagtcaattttgggataagttt
atatcggatgtcagttccgtaaaaactattgaagctagtgagatattgaaagctattacc
agagatttggagaattatgcattttcttcagtagatggcgaaagcattagcagagtttgt
ccacagtgtggatcgggtgagctcatgctcaatatcggtaagactagtgcgtttttggga
tgcaatagataccctgaatgtagatatacgagaggaattggtggagatggtagcgcttct
ccggctgatgatgcctcaagaattttgggtatagatgaggagactcaggaagagattttc
ctaaagcgtgggccatacggtgaatatttgcagttaggtaacagcacaaagcgtgtttct
ttaactaagagcgctggtgaaattactgtagatcttgcgaagaagatgttatctcttcca
ttggttcttggatgctatccggatactgataaagagatcaagttgggtattggccgtttc
ggaccataccttttttacaatggcgtgtatttttctatcaaagatagggaagactacatc
aacataagccatcaggaagctgtagaaataatagataagcaatctgacaaaaaggctaaa
cttttgggtcagaacaaggatggtaaagatatatacgtatgtaagggcaggtacggcttt
tacctaaagtgtgacaagacaagtgtagcgctcaagggtagatctgaagacattacgcta
gaggatgctatattgttactgagtcagaaacagtaa
DBGET
integrated database retrieval system
