Anaplasma phagocytophilum JM: WSQ_04725
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Entry
WSQ_04725 CDS
T02754
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
apha
Anaplasma phagocytophilum JM
Pathway
apha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WSQ_04725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apha03021
]
WSQ_04725
03400 DNA repair and recombination proteins [BR:
apha03400
]
WSQ_04725
Enzymes [BR:
apha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WSQ_04725
Transcription machinery [BR:
apha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WSQ_04725
DNA repair and recombination proteins [BR:
apha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WSQ_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AGR80233
LinkDB
All DBs
Position
complement(1089919..1094148)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKTLDLYGYTSIAQSFDKICISIASPESIRAMSYGEIKDISTTNYRTFKVEKGGLFCPKI
FGPVNDDECLCGKYRKKRYRGIVCEKCGVEVTSSKVRRERMGHIELVSPVAHIWFLKSLP
SRIGALLDMPLKAIENILYSGDFVVIDPVATPFAKGEVISEVVYNQARDAYGEDGFFALT
GVEAIKELLTRLDLEAIRATLRNELESTSSEMKRKKVVKRLRLVENFIKSGNRPEWMILT
VIPVLPPDLRPLVSLENGRPAVSDLNHHYRTIINRNNRLEKLLKLNPPAIMIRNEKRMLQ
EAVDALFDSSRRSYVSSRVGSMGYKKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGP
SLKLHQCGLPKKMALELFKPFICSKLKMYGIAPTVKLANKMIQSEKPDVWDVLDEVIKEH
PILLNRAPTLHRLGLQAFDPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSQEAQLE
ARVLMMSTNNILSPSNGRPIIVPSKDIVLGIYYLTLLEEDPEVREVQTFAEFSHVEYALH
EGIVHTCSRIKYRMQKSAADGTVSSEIVETTPGRLILWQIFPQHKDLTFDLINQVLTVKE
ITSIVDLVYRSCGQRETVEFSDKLMYLGFKYASQSGISFGCKDMIIPDTKAAHVEDASEK
IREFSIQYQDGLITKSERYNKVVDEWSKCTDLIARDMMKAISLCDEKGKYNSIYMMANSG
ARGSASQMKQLAGMRGLMAKPSGEIIETPIISNFREGLSVFEYFNSTHGARKGLADTALK
TANSGYLTRRLVDVAQDCTVVEHDCGTSGGVVARAVIEGGVVVATLDSVVLGRVAAVDTY
NPVTGEKLFTSGELIDESKLDKIRVAGLDAVKVRSPLTCESKQGICALCYGRDLAIGDLV
SIGEAVGVIAAQSVGEPGTQLTMRTFHVGGTAMRGVEVSNLIALMDATVKLVNSNVVTDK
YGNQIVMSRSCEVVLLDAAGNEKMRHSVPYGAKLYATEGQSVSMMEKIAEWDPYTIPIIT
EKTGTIKYVDLIYGVSINEVLDESTGISNRVVVDWKMHLQGANLRPRLVLLDDNGAVVTL
SSDLEASYFVPIGAVLNVQDGQRVHAGDVITRIPRGSIKTRDITGGLPRVIELFEARKPK
EHAIVSDVDGYVEFGKDYYRSKRRIFIRPVDKSLPVVEYLVPKGKHTIVNEGDFVHKGDL
LMDGDPDQHDILRVLGTEALANYMISEIQQVYRLQGVKIDNKHIEVILRQMLQKVEITEP
GDTMYLIGEHVSREEVMKLNRKLAEAGKKEVSYVPILQGITKASLDTNSFISAASFQETT
KVLTEAAFAGKEDPLYGLKENVIVGRLIPAGTGFIMNKIKKLAMLDQSDYATYYNSELRG
IMGDLGSSIIEEFQTPAPDGSISGSVVDY
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttggatttgtatggctataccagtatagcacagtcgttcgataagatttgc
atatccatagctagtccagaaagtataagggctatgtcctatggagaaatcaaggatatc
tctactactaactatcgtacctttaaggtggagaagggggggctattctgtcctaagatc
tttggtccggttaatgatgacgagtgtctttgtggtaagtataggaaaaagcgctacagg
ggcattgtctgtgagaaatgcggagtggaggtaacttcttctaaagttagaagagagaga
atggggcacatagagttggtctcacctgttgctcatatttggtttcttaaatccctgccg
tcacgtataggtgctctgctagacatgcctttaaaggctatagagaatatactatatagt
ggagattttgtagtaattgatccggtagctactccttttgctaagggggaagtaatcagt
gaggtagtttataatcaggcgcgggatgcctatggtgaggatggattttttgcgctcact
ggtgttgaagctataaaggagttgctaactcgccttgatttggaggctatcagggctact
ttgaggaatgagcttgagtcaacttcttcggaaatgaagcgtaagaaggttgttaagagg
ctcaggcttgttgagaattttattaagtctggtaataggccggagtggatgatcttgact
gtaattcctgttcttccaccggatttgaggccgttggtatcactggaaaatggtagacct
gcggtatcagatttaaatcaccattacaggactataataaaccgtaataacagattggaa
aagctactcaagctgaatcctcctgcgatcatgatacgcaatgaaaagaggatgttgcaa
gaagcggtagatgctctgtttgacagcagtcggcgtagttacgtttccagtagagttgga
agcatgggctataagaagtctcttagcgacatgctaaagggtaagcagggtaggtttagg
cagaacttgcttggtaaaagggttgactattctggtaggtcagtaatagttgtgggccct
agtttgaagctgcatcagtgtggtttgcccaagaagatggctcttgagctgttcaagccg
ttcatttgttctaagctgaagatgtacggtattgctccgactgtgaagttggctaacaag
atgattcagagtgagaagcctgatgtttgggatgttttggatgaagtgattaaagagcat
cctattctccttaatagggctcctacactgcatagattgggtcttcaggcgtttgatcct
gtattgatagaaggtaaggcaatacagttgcatccgttggtatgtagtgcgtttaatgcc
gatttcgatggtgatcagatggcggtacacgtgccattgtctcaagaggcgcagcttgag
gcgcgcgtgttgatgatgtctacaaataacatcttgagtccttctaacggtaggccaatt
atagttccgtctaaggatatcgttcttgggatatactatttaacgttgttggaagaagat
cctgaagtgcgtgaagtgcagacttttgcggagttcagccacgtggagtacgcattgcat
gaggggattgtgcatacgtgctcaaggataaagtacagaatgcagaagagtgcagctgat
ggtactgtatctagcgaaatagttgagactacgcctggtaggttgatattgtggcagata
ttcccgcagcataaggatttgacttttgacttgatcaaccaagtgcttacggttaaggaa
atcacctccattgtggatcttgtctatagaagttgtggtcagagggagacggtagagttc
tctgacaaactgatgtatttgggattcaagtatgcttcgcaatcaggtatttcttttggt
tgtaaggatatgattattcctgatactaaggctgcgcacgttgaagatgctagcgaaaag
atcagggaattctctatacagtatcaggatggtttgataaccaagagcgagcgctataac
aaagtggttgatgagtggtctaagtgtaccgatttgattgctagggatatgatgaaggct
atatctttatgtgatgagaaagggaaatataactcgatttacatgatggcgaattctggg
gctagaggttctgcgtctcagatgaagcagcttgctggtatgagaggtctgatggcgaaa
ccgtcaggtgagattattgagactccgattatttcgaattttagggaagggttgagtgta
tttgaatatttcaattctactcacggggctcgtaaaggtcttgctgatacagcattgaag
actgctaactccggatatctaactcgtaggcttgtagatgtagcgcaggattgtacagtt
gttgaacatgattgcggcactagcgggggcgttgttgcgagagcggtcatagagggtggt
gttgtagtagcaacgctggatagtgtggtattaggaagggttgctgctgtagatacctat
aatcctgttacaggagagaagttatttacttcaggtgagcttattgatgaaagcaagctt
gataagataagagttgcgggattagatgcggtgaaggtgcggtcaccgcttacttgtgag
tccaaacaaggtatttgtgctctatgttatggtagagatctagctattggggatttggtg
tccataggggaagctgtaggtgtgatcgctgctcagtctgttggggaaccgggtacacag
ctgacgatgagaacgttccacgttggtggtactgctatgcgtggtgttgaggtatctaat
ctgatagccttgatggatgcgactgttaagctggttaacagtaatgtggttactgacaag
tacggtaatcagatagttatgagtaggtcgtgtgaagttgtgctgctggatgctgcgggc
aatgagaagatgcggcatagtgtgccatatggcgctaagttgtatgctaccgaagggcaa
tcggtgagtatgatggagaagattgctgagtgggatccttatactatacctattatcact
gagaagacaggtactataaagtatgtggaccttatatatggggtctctatcaacgaggta
cttgatgagtcgactggtatttctaacagggtggttgtagattggaagatgcatttacaa
ggtgcaaatctgcggcctaggcttgtgttgctagacgataatggtgctgtggttacatta
tcgagtgacttggaagctagttattttgtcccgataggtgcggtattgaatgtacaggat
gggcaaagggtacatgctggtgatgttatcacgaggatacctaggggttctatcaagacg
cgtgatattacgggtggtctacctagggttatagagctgtttgaagctcgtaagccgaag
gagcatgctattgttagtgacgttgatggatacgttgagttcggtaaggattattaccgt
tcgaagaggcgtatatttatacgtcctgtagacaagagcttgcctgtagttgaatatcta
gttcctaagggtaagcacacaatagtcaatgagggtgattttgtgcataagggtgatctg
ttaatggacggtgatcctgatcagcacgatatccttagggtgttaggaactgaagcgctg
gcaaattacatgatatccgagatccagcaggtatataggttgcagggtgttaagatagac
aacaagcacatagaggtgatactcaggcagatgttgcagaaggtagagattactgagccg
ggtgatacaatgtacctgataggcgagcatgtgtctcgtgaagaggttatgaagctgaat
aggaagcttgctgaggctggaaagaaagaagtttcttatgtgccgatactgcaggggatc
actaaggctagtctggatactaactctttcatatctgctgcgtcattccaggagacaact
aaggtattgactgaggcggcttttgcaggaaaagaagatcctctatatgggttgaaggaa
aatgtgattgtcggtcgtctgataccagcaggtacagggttcataatgaacaagatcaag
aagcttgctatgcttgatcagagcgactatgcaacatattacaatagcgaattgcgagga
atcatgggtgatttgggaagctctataatcgaagagtttcaaactccagctcctgatggt
agcataagcggctccgttgtggattactag
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integrated database retrieval system
