Alkalihalobacillus phoenicis: AA0017_03890
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Entry
AA0017_03890 CDS
T11617
Name
(GenBank) collagen-like protein
Organism
aphe Alkalihalobacillus phoenicis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-ProteinID:
XNQ63204
LinkDB
All DBs
Position
859087..863754
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AA seq
1555 aa
AA seq
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MYFKNNKRNCCGAKPPVIIPSGFPDGFGPSRRGPQGPPGPRGPSGATGPTGATGVTGVIG
ATGSTGATGVTGATGATGVTGATGVTGVTGATGATGVTGATGATGVTGATGATGATGVTG
VTGATGATGATGVTGVTGATGVTGATGVTGAIGVTGVTGATGVTGATGVMGATGATGVTG
VTGATGVTGATGATGATGVTGATGVTGVTGATGATGVTGVTGATGAIGATGVTGATGVTG
VTGVTGATGVMGVTGATGVTGVTGATGVTGPTGVTGATGVTGPTGVTGATGVTGVTGAAG
VTGGTGATGPTGPTGVTGATGATGATGVTGVTGVTGATGVTGATGATGATGVTGATGVTG
ATGATGVTGPTGVTGVTGATGVTGATGVTGVTGVTGATGVTGATGATGVTGLTGVTGTTG
VTGVTGPTGVTGATGVTGATGITGVTGATGATGATGVTGATGVTGATGVMGVTGATGVTG
ATGVTGVTGATGATGATGATGVTGVTGATGVTGATGVTGPTGATGVTGATGVTGATGATG
PTGVTGVTGAIGVTGATGVTGATGATGVTGATGVTGATGVTGPTGVTGVTGVTGATGPTG
PTGVTGATGATGATGVTGVTGVTGATGVTGATGVTGPTGATGVTGATGATGVTGSTGVTG
ATGVTGVTGATGVTGPTGVTGATGVTGATGATGVTGATGVTGATGVTGAIGVTGATGVTG
ATGVTGATGATGATGATGVTGATGVTGATGATGVTGATGATGATGVTGATGVTGPTGATG
VTGATGVTGATGVTGVTGATGPTGVTGVTGATGATGAIGVTGATGVTGATGVTGATGVTG
ATGVTGATGVTGATGVTGATGVTGVTGPTGATGVTGATGVTGATGVTGATGPTGVTGVTG
ATGVTGAIGVTGATGVTGVTGVTGATGVTGVTGVTGPTGATGVTGATGVTGATGVTGATG
PTGVTGATGPTGVTGATGATGVTGATGATGATGATGAIGVTGATGVTGVTGVTGATGVTG
ATGVTGATGVTGPTGATGVTGVTGATGATGATGVTGATGVTGVTGPTGATGATGVTGATG
VTGATGVTGPTGATGVTGATGVTGATGVTGATGPTGVTGVTGATGVTGAIGVTGATGVTG
ATGVTGATGVTGATGVTGATGVTGVTGPTGATGVTGATGVTGATGVTGATGPTGVTGATG
ATGVTGATGVTGATGATGVTGATGVTGVTGATGATGVTGATGATGVTGPTGVTGATGATG
ATGVTGATGVTGATGATGVTGPTGVTGATGVTGATGVTGATGVTGATGVTGPTGVTGTTG
VTGVTGPTGVTGATGVTGATGATGVTGATGVTGATGVTGVTGVTGATGVTGPTGVTGATG
VTGVTGATGATGPNILETGFSAFRSPSTTNAPIQLTNWTTTPPFYTDPGFNAAAGTFTVP
ESGRYSFKAVLSYSTTVALTVGSSANPQFVIRRTSPGPEDLILGYFPVVNINLALVNIRA
ILGQGTVTLGGDLDLNAGDVIAIFYVADGLTLNLNIGAGNARANVWSVHRLTDDI
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
ttgtattttaaaaataataaaaggaattgttgtggagcgaaaccaccagttattattccg
agtggttttccagatggatttgggccatctagaaggggcccacaaggaccacctggacct
agagggccaagtggagcgacgggtccaaccggagcgacaggagtcaccggagtaatagga
gcaacgggctcaaccggagccacaggagtaaccggggcaacgggagcgaccggggtaacg
ggagccacgggagtaactggggtaacgggagccacgggagcaacaggagtaaccggagcc
acgggagcaacaggagtaaccggagccacaggagccacgggagcaaccggggtaacggga
gtaaccggagccacaggagccacgggagcaaccggggtaacgggagtaaccggagccaca
ggagtaactggggcaacgggagtaactggagccataggagtaaccggagtaacaggagcg
acgggagtaactggggcaaccggagtaatgggagccacgggagcaaccggggtaacagga
gtaacaggagcgacgggagtaaccggagcaactggggcaacaggagccacgggagtaacc
ggagccaccggggtaacaggagtcaccggagcaactggggcaacaggagtaactggggta
accggagcaacgggagcaatcggagcaacgggagtaaccggagcaaccggggtaacagga
gtcaccggagtaacgggagccacgggagtaatgggagtaacgggagcaacaggggtaacg
ggagtaacaggggcaaccggagtaactggtccgacaggagtaacgggagcaaccggagta
actggtccgacaggagtaacaggagcaaccggggtaacgggagtaacaggagcggcggga
gtaacagggggaactggagcaaccggcccaacgggtccgaccggagtaaccggagccacc
ggagcaactggggcaacgggagtaacaggagtaacaggggtaacaggagcaacgggagta
acaggagcaaccggagcaaccggagcaaccggagtaaccggagcaacaggagtaacaggg
gcaacgggagcaacaggggtaacaggtccaaccggagtaaccggagtaaccggagcaaca
ggagtaacaggggcaacgggagtaaccggagtaacaggagtaaccggagccacaggagta
acaggggcaacgggagcaaccggggtaacaggtctaaccggagtcaccggaacaacagga
gtaacgggagtaacaggtccgaccggggtaacaggagccacgggagtaacaggggcaacc
ggaataacaggggtaacaggagcaaccggggcaaccggagcgacgggagtaactggggca
acaggagtaacgggagccacgggagtaatgggagtaacgggagcaaccggggtaacagga
gcaaccggggtaacaggagtaaccggagcgacgggagcaaccggggcaacaggagcaacc
ggagtaacaggagtaaccggggcaacgggagtaaccggagcgacaggagtaacagggcca
acgggagccacgggagtaactggggcaacaggagtaacgggagcaaccggggcaacaggt
ccgaccggagtaaccggagtaactggggcaataggagtaacgggagcaaccggggtaaca
ggagcaactggagcaacaggagtaacaggagcgacgggagtaactggggcaaccggagta
acaggtccaaccggggtaacgggagtaacaggggtaactggagcaaccggcccaacgggt
ccgaccggagtaaccggagccaccggagcaacaggggcaacgggagtaacaggagtaaca
ggggtaacaggagcaacgggagtaacaggagcaaccggagtaactggcccaacgggagcc
acaggagtcaccggggcaacgggagcaacaggagtaacaggttcaaccggagtcaccgga
gcgacgggagtaacaggggtaacaggagcaaccggggtaacaggcccaacaggagtaaca
ggggcaacaggagtaacgggagcaacgggagcaaccggggtaaccggagccaccggagta
actggggcaactggagtaactggagccataggagtaaccggagccacaggagtaacagga
gcgacgggagtaacaggggcaaccggagcaacgggagcaaccggagcaacgggagtaacc
ggagcaacgggagtaacaggggcaacaggagcaacaggggtaacaggagcaacgggagca
accggagcaacgggagtaaccggagcaaccggagtaactggcccaacgggagccacagga
gtcaccggggcaaccggagtcaccggagcgacgggagtaacaggggtaacaggagcaacc
ggcccaacaggagtaacaggggtaacaggggcaacgggagcaaccggagccataggagta
accggagccacaggagtaacaggagcgacgggagtaacaggagcgacgggagtaacagga
gcgacgggagtaacaggggcaacaggagtaacgggagcaaccggggtaacaggagcaacc
ggagtaaccggagtaactggcccaacgggagccacaggagtaaccggggcaacaggagta
accggagcgacgggagtaactggggcaaccggcccaacaggagtaactggggtaacaggg
gcaacgggagtaactggagccataggagtaaccggagcaaccggagtaacaggagtaaca
ggagtaacaggagcaacgggagtaaccggagtaaccggagtaactggcccaacgggagcc
acaggagtaaccggggcaacaggagtaaccggagcgacgggagtaactggggcaaccggc
ccaacaggagtaacaggggcaaccggcccaacaggagtaacaggggcaaccggagcaacg
ggagtaaccggagcaaccggggcaacaggggcaacgggagcaaccggagccataggagta
accggagcaaccggagtaacaggagtaacaggagtaacaggagcaacgggagtaacggga
gcaaccggagtaacaggggcaacgggagtaacaggtccaaccggagcgacgggagtaaca
ggggtaacaggagcaacgggagcaaccggagcaacgggagtaaccggagcaacgggagta
accggagtaactggcccaacgggagccacaggggcaaccggagtaacgggagcaaccggg
gtaacaggagcaaccggagtaactggcccaacgggagcaaccggagtaaccggggcaaca
ggagtaaccggagcgacgggagtaactggggcaaccggcccaacaggagtaactggggta
acaggggcaacgggagtaactggagccataggagtaaccggagccacaggagtaaccgga
gcgacgggagtaacaggggcaacaggagtaacgggagcaaccggggtaacaggagcaacc
ggagtaaccggagtaactggcccaacgggagccacaggagtaaccggggcaaccggagta
accggagcgacgggagtaactggggcaaccggcccaacaggagtaacaggggcaaccgga
gcaacgggagtaaccggagcaacgggagtaaccggagcaaccggagcaacaggagtaaca
ggggcaacgggagtaaccggagtaaccggagcaaccggagcaacaggagtaacaggggca
acgggagcaacaggagtaacaggtccaaccggagtaaccggagcaaccggagcaaccgga
gcaacaggagtaaccggagcaacaggagtaacaggggcaacgggagcaacaggggtaaca
ggtccaaccggagtaacaggagcgacgggagtaacaggagcaaccggagtaacaggggcc
acaggagtaaccggagcaaccggggtaacaggtccaaccggagtcaccggaacaacagga
gtaacgggagtaacaggtccgaccggggtaacaggagcaacgggagtaacaggggcaaca
ggagcaacgggagtaacaggggcaacaggagtaacaggagccacaggagtaaccggagta
acaggggtaacaggagcaacaggggtaacaggtccaaccggagtaacaggagcaaccggg
gtaacaggagtaacgggggccacgggagcaacaggtcccaatatattagaaacgggattc
tcggcatttagatcaccgtctactacaaatgctcctattcaactgacgaactggacgacg
acacctcctttctatacagatcctggatttaatgcagctgcgggtacgtttacagttcct
gagagtggaaggtattcatttaaagcagttctatcgtacagtacgactgtagctttaaca
gtaggaagctcggcaaatccacagtttgtaattagaagaacgtcgccaggtccggaagat
ttaatattaggatactttcctgtcgtaaacataaaccttgctttagtaaatattagagcg
attctcgggcaagggacagtgacacttggaggagatttagatttaaatgcaggagatgtt
atcgcaattttttatgtggcggatggacttactcttaaccttaatataggtgcaggaaat
gcacgagcgaatgtttggtcagtccacagattgactgacgatatataa
DBGET
integrated database retrieval system
