Abyssogena phaseoliformis symbiont: CVPH_0258
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Entry
CVPH_0258 CDS
T07717
Symbol
rumA
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
aphf
Abyssogena phaseoliformis symbiont
Brite
KEGG Orthology (KO) [BR:
aphf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aphf03009
]
CVPH_0258 (rumA)
Enzymes [BR:
aphf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CVPH_0258 (rumA)
Ribosome biogenesis [BR:
aphf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CVPH_0258 (rumA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
TRAM
Methyltransf_31
Methyltransf_25
MTS
PCMT
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_11
Methyltransf_23
Methyltransf_2
Spc24
PrmA
Motif
Other DBs
NCBI-ProteinID:
BBB22400
UniProt:
A0A7U3V1G6
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All DBs
Position
254992..256308
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AA seq
438 aa
AA seq
DB search
MSRRRKLKAKTYELNIESLSHEGRGIARFEDKVIFVSGALSGELVIVDRTFSRAKFEEAD
VKQVLKPAANRITPKCDVFGICGGCSFQHLSSEDQIQAKGNWLKDVFANQVKIEPKTWLK
PLQVQSWGYRRKARLGIRYVAKKDKVLVGFREKKSSFITNMSRCEILHPSIGEHLEVLAD
CIERLSIKSSIPQFEVAIAENNTVLILKHLEPLSVKDEQILVDCAQQLNIAFYTQSGGLD
SVKPLGKPVMLTYSHPNHDIIMEFLPTDFVQVNFKLNQKMVDLALELLELNEFDEVIDLF
CGLGNFTLPIARHAKHVAGIEGDLGLVERAKYNAEKNSITNVDFYKADLFKEVAGFEWFR
GKTYNKALIDPARSGAIEIVELLPKLGVTRLVYVSCNPATLARDTIKLIELGFTLETAGV
MDMFPQTAHVESIALFTR
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaagaagaaagctaaaagctaaaacttacgagttaaatatagagtcactttct
cacgaagggcgggggattgcacgttttgaagataaggttatttttgtgagcggtgcgtta
tcaggcgaacttgtgattgttgatcgcacattttcacgtgctaaatttgaagaggctgat
gttaagcaagtattaaagcctgcggctaatcgaatcacacctaaatgtgacgtatttggt
atttgtggcggttgttcgtttcaacatttatccagtgaagatcaaatacaggctaagggt
aattggctaaaagatgtgtttgctaatcaggtaaaaattgagcctaagacttggttaaag
ccacttcaagttcaaagttggggctatcggcgtaaggctagattgggtattcgatatgtg
gctaaaaaagacaaagtattggttgggtttagagaaaaaaaatcttcatttatcaccaat
atgagtcgctgcgagattttgcatccatccataggtgagcatcttgaagtacttgctgat
tgtattgaaaggcttagtattaagtccagtattccacagtttgaagtggcaattgctgaa
aataatacggttcttattttaaaacaccttgaacctttgagtgtaaaagatgagcaaata
ttagtagattgtgcccaacaattaaacattgccttttatacccaaagcggtggtttagac
agtgttaagccattaggaaagcctgttatgctaacatattcacaccctaatcatgatatt
atcatggaatttttacccactgattttgttcaagtgaactttaaacttaatcagaaaatg
gttgatttagcattagaattacttgaacttaatgagtttgatgaggtgattgatttattc
tgcggtctgggtaactttaccttgccaattgcaagacatgctaagcatgtggcgggtatt
gaaggtgatttaggattggttgaaagggcaaagtacaatgctgaaaaaaacagcattacc
aatgttgatttttataaggcagatttatttaaagaagtggcaggctttgagtggtttaga
ggtaagacttacaacaaagcacttattgacccagctagatctggtgcaattgaaattgta
gagttactgcctaaattaggcgtaacaagattggtgtatgtgtcatgtaatcctgcgaca
ttggctcgcgataccatcaagttaattgagcttgggtttacgcttgaaactgcaggggtg
atggatatgttccctcaaactgctcatgtagaatccattgctttatttactcgatga
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